From: Roman Scherer <roman.scherer@burningswell.com>
To: 56193@debbugs.gnu.org
Subject: [bug#56193] [PATCH] Add Climate Data Operators package
Date: Sat, 25 Jun 2022 12:18:24 +0200 [thread overview]
Message-ID: <87mte1vy30.fsf@burningswell.com> (raw)
In-Reply-To: <87a6a26sai.fsf@burningswell.com>
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Hi Antero,
thanks for your review! Here's an updated version of the patch. I added
--with-netcdf to the configure flags, removed the build utils, added
spaces between sentences and don't use a list for the licence field
anymore.
Could you have another look please?
I'm not sure if I addressed all lint issues, since this command is
failing on my machine recently. Any idea what this could be? Here's the
backtrace of the lint command:
```
[roman@thinkpad guix]$ ./pre-inst-env guix lint cdo
;;; note: source file /home/roman/workspace/guix/gnu/packages/geo.scm
;;; newer than compiled /home/roman/workspace/guix/gnu/packages/geo.go
;;; note: source file /home/roman/workspace/guix/gnu/packages/geo.scm
;;; newer than compiled /home/roman/.cache/guile/ccache/3.0-LE-8-4.5/home/roman/workspace/guix/gnu/packages/geo.scm.go
;;; Failed to autoload html->sxml in (htmlprag):
;;; no code for module (htmlprag)
Backtrace:
In ice-9/boot-9.scm:
1752:10 18 (with-exception-handler _ _ #:unwind? _ # _)
In unknown file:
17 (apply-smob/0 #<thunk 7f3b46a28f60>)
In ice-9/boot-9.scm:
724:2 16 (call-with-prompt _ _ #<procedure default-prompt-handle…>)
In ice-9/eval.scm:
619:8 15 (_ #(#(#<directory (guile-user) 7f3b46a22c80>)))
In guix/ui.scm:
2238:7 14 (run-guix . _)
2201:10 13 (run-guix-command _ . _)
In ice-9/boot-9.scm:
1752:10 12 (with-exception-handler _ _ #:unwind? _ # _)
1752:10 11 (with-exception-handler _ _ #:unwind? _ # _)
In guix/store.scm:
659:37 10 (thunk)
In srfi/srfi-1.scm:
634:9 9 (for-each #<procedure 7f3b4531efa0 at guix/scripts/lin…> …)
In guix/scripts/lint.scm:
65:4 8 (run-checkers _ _ #:store _)
In srfi/srfi-1.scm:
634:9 7 (for-each #<procedure 7f3b31769de0 at guix/scripts/lin…> …)
In guix/scripts/lint.scm:
74:21 6 (_ _)
In guix/lint.scm:
1476:5 5 (check-for-updates #<package cdo@2.0.5 /home/roman/work…>)
811:2 4 (call-with-networking-fail-safe _ _ _)
In ice-9/boot-9.scm:
1752:10 3 (with-exception-handler _ _ #:unwind? _ # _)
1685:16 2 (raise-exception _ #:continuable? _)
1683:16 1 (raise-exception _ #:continuable? _)
1685:16 0 (raise-exception _ #:continuable? _)
ice-9/boot-9.scm:1685:16: In procedure raise-exception:
error: html->sxml: unbound variable
```
Thanks, Roman.
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From d003fb5a519341a23973e8565ac7bc3195742808 Mon Sep 17 00:00:00 2001
From: r0man <roman@burningswell.com>
Date: Sat, 25 Jun 2022 12:10:00 +0200
Subject: [PATCH] Add Climate Data Operators package
This patch adds CDO, a collection of command line Operators to manipulate and
analyse Climate and NWP model Data to Guix's geo module.
---
gnu/packages/geo.scm | 27 +++++++++++++++++++++++++++
1 file changed, 27 insertions(+)
diff --git a/gnu/packages/geo.scm b/gnu/packages/geo.scm
index 7b29c55088..7ce1d2bda2 100644
--- a/gnu/packages/geo.scm
+++ b/gnu/packages/geo.scm
@@ -119,6 +119,33 @@ (define-module (gnu packages geo)
#:use-module (gnu packages xml)
#:use-module (gnu packages xorg))
+(define-public cdo
+ (package
+ (name "cdo")
+ (version "2.0.5")
+ (source (origin
+ (method url-fetch)
+ (uri (string-append
+ "https://code.mpimet.mpg.de/attachments/download/26823/cdo-"
+ version ".tar.gz"))
+ (sha256
+ (base32
+ "1khdbd5cmnn7qm6hcqg4md5wbq14fs6brrns8b3g18diqgqvpvpd"))))
+ (build-system gnu-build-system)
+ (arguments
+ `(#:configure-flags
+ (list (string-append "--with-netcdf=" (assoc-ref %build-inputs "netcdf")))))
+ (inputs
+ (list netcdf))
+ (native-inputs
+ (list pkg-config))
+ (home-page "https://code.mpimet.mpg.de/projects/cdo")
+ (synopsis "Climate Data Operators")
+ (description "CDO is a collection of command line Operators to manipulate and analyse
+Climate and NWP model Data. Supported data formats are GRIB 1/2, netCDF 3/4,
+SERVICE, EXTRA and IEG. There are more than 600 operators available.")
+ (license license:bsd-3)))
+
(define-public memphis
(package
(name "memphis")
--
2.36.1
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next prev parent reply other threads:[~2022-06-25 10:27 UTC|newest]
Thread overview: 9+ messages / expand[flat|nested] mbox.gz Atom feed top
2022-06-24 14:28 [bug#56193] Add Climate Data Operators package Roman Scherer
2022-06-24 19:10 ` [bug#56193] (no subject) Antero Mejr via Guix-patches via
2022-06-25 10:18 ` Roman Scherer [this message]
2022-06-25 11:09 ` [bug#56193] [PATCH] Add Climate Data Operators package Tobias Geerinckx-Rice via Guix-patches via
2022-06-25 11:43 ` Roman Scherer
2022-06-25 12:05 ` Tobias Geerinckx-Rice via Guix-patches via
2022-06-25 12:18 ` Roman Scherer
2022-07-03 14:07 ` bug#56193: " Ludovic Courtès
2022-07-03 16:47 ` [bug#56193] " Roman Scherer
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