From mboxrd@z Thu Jan 1 00:00:00 1970 Return-Path: Received: from mp1 ([2001:41d0:2:4a6f::]) (using TLSv1.3 with cipher TLS_AES_256_GCM_SHA384 (256/256 bits)) by ms11 with LMTPS id SOk5CC+hrl4UOQAA0tVLHw (envelope-from ) for ; Sun, 03 May 2020 10:47:11 +0000 Received: from aspmx1.migadu.com ([2001:41d0:2:4a6f::]) (using TLSv1.3 with cipher TLS_AES_256_GCM_SHA384 (256/256 bits)) by mp1 with LMTPS id 0JzWLzmhrl4/bgAAbx9fmQ (envelope-from ) for ; Sun, 03 May 2020 10:47:21 +0000 Received: from lists.gnu.org (lists.gnu.org [IPv6:2001:470:142::17]) (using TLSv1.2 with cipher ECDHE-RSA-AES256-GCM-SHA384 (256/256 bits)) (No client certificate requested) by aspmx1.migadu.com (Postfix) with ESMTPS id C676F9445C6 for ; Sun, 3 May 2020 10:47:19 +0000 (UTC) Received: from localhost ([::1]:41316 helo=lists1p.gnu.org) by lists.gnu.org with esmtp (Exim 4.90_1) (envelope-from ) id 1jVC9X-0002Mm-Pz for larch@yhetil.org; Sun, 03 May 2020 06:47:19 -0400 Received: from eggs.gnu.org ([2001:470:142:3::10]:37978) by lists.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from ) id 1jVC9G-0002FJ-6U for guix-patches@gnu.org; Sun, 03 May 2020 06:47:03 -0400 Received: from debbugs.gnu.org ([209.51.188.43]:43197) by eggs.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_128_GCM_SHA256:128) (Exim 4.90_1) (envelope-from ) id 1jVC9F-0000Y1-RT for guix-patches@gnu.org; Sun, 03 May 2020 06:47:01 -0400 Received: from Debian-debbugs by debbugs.gnu.org with local (Exim 4.84_2) (envelope-from ) id 1jVC9F-00009D-Oa for guix-patches@gnu.org; Sun, 03 May 2020 06:47:01 -0400 X-Loop: help-debbugs@gnu.org Subject: [bug#40691] [PATCH 3/3] gnu: Add gromacs. Resent-From: Ludovic =?UTF-8?Q?Court=C3=A8s?= Original-Sender: "Debbugs-submit" Resent-CC: guix-patches@gnu.org Resent-Date: Sun, 03 May 2020 10:47:01 +0000 Resent-Message-ID: Resent-Sender: help-debbugs@gnu.org X-GNU-PR-Message: followup 40691 X-GNU-PR-Package: guix-patches X-GNU-PR-Keywords: patch To: Vincent Legoll Cc: 40691@debbugs.gnu.org Received: via spool by 40691-submit@debbugs.gnu.org id=B40691.1588502810542 (code B ref 40691); Sun, 03 May 2020 10:47:01 +0000 Received: (at 40691) by debbugs.gnu.org; 3 May 2020 10:46:50 +0000 Received: from localhost ([127.0.0.1]:54743 helo=debbugs.gnu.org) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1jVC94-00008g-0r for submit@debbugs.gnu.org; Sun, 03 May 2020 06:46:50 -0400 Received: from eggs.gnu.org ([209.51.188.92]:34896) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1jVC90-00008R-2z for 40691@debbugs.gnu.org; Sun, 03 May 2020 06:46:49 -0400 Received: from fencepost.gnu.org ([2001:470:142:3::e]:50436) by eggs.gnu.org with esmtp (Exim 4.90_1) (envelope-from ) id 1jVC8u-0008Sd-4u; Sun, 03 May 2020 06:46:40 -0400 Received: from [2a01:e0a:1d:7270:af76:b9b:ca24:c465] (port=49108 helo=ribbon) by fencepost.gnu.org with esmtpsa (TLS1.2:RSA_AES_256_CBC_SHA1:256) (Exim 4.82) (envelope-from ) id 1jVC8t-0005i0-JZ; Sun, 03 May 2020 06:46:39 -0400 From: Ludovic =?UTF-8?Q?Court=C3=A8s?= References: <20200502164325.2028-1-vincent.legoll@gmail.com> <20200502164325.2028-3-vincent.legoll@gmail.com> Date: Sun, 03 May 2020 12:46:36 +0200 In-Reply-To: <20200502164325.2028-3-vincent.legoll@gmail.com> (Vincent Legoll's message of "Sat, 2 May 2020 18:43:25 +0200") Message-ID: <87lfm91ek3.fsf@gnu.org> User-Agent: Gnus/5.13 (Gnus v5.13) Emacs/26.3 (gnu/linux) MIME-Version: 1.0 Content-Type: text/plain; charset=utf-8 Content-Transfer-Encoding: quoted-printable X-Spam-Score: -2.3 (--) X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list X-Spam-Score: -3.3 (---) X-BeenThere: guix-patches@gnu.org List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: guix-patches-bounces+larch=yhetil.org@gnu.org Sender: "Guix-patches" X-Scanner: scn0 X-Spam-Score: -1.01 Authentication-Results: aspmx1.migadu.com; dkim=none; dmarc=none; spf=pass (aspmx1.migadu.com: domain of guix-patches-bounces@gnu.org designates 2001:470:142::17 as permitted sender) smtp.mailfrom=guix-patches-bounces@gnu.org X-Scan-Result: default: False [-1.01 / 13.00]; RCVD_VIA_SMTP_AUTH(0.00)[]; GENERIC_REPUTATION(0.00)[-0.49361860432131]; TO_DN_SOME(0.00)[]; R_SPF_ALLOW(-0.20)[+ip6:2001:470:142::/48:c]; IP_REPUTATION_HAM(0.00)[asn: 22989(0.15), country: US(-0.00), ip: 2001:470:142::17(-0.49)]; DWL_DNSWL_FAIL(0.00)[2001:470:142::17:server fail]; MX_GOOD(-0.50)[cached: eggs.gnu.org]; RCPT_COUNT_TWO(0.00)[2]; MAILLIST(-0.20)[mailman]; FREEMAIL_TO(0.00)[gmail.com]; RCVD_IN_DNSWL_FAIL(0.00)[2001:470:142::17:server fail]; RCVD_TLS_LAST(0.00)[]; R_DKIM_NA(0.00)[]; ASN(0.00)[asn:22989, ipnet:2001:470:142::/48, country:US]; MID_RHS_MATCH_FROM(0.00)[]; TAGGED_FROM(0.00)[larch=yhetil.org]; ARC_NA(0.00)[]; FORGED_RECIPIENTS_MAILLIST(0.00)[]; FROM_NEQ_ENVFROM(0.00)[ludo@gnu.org,guix-patches-bounces@gnu.org]; FROM_HAS_DN(0.00)[]; TAGGED_RCPT(0.00)[]; MIME_GOOD(-0.10)[text/plain]; DMARC_NA(0.00)[gnu.org]; HAS_LIST_UNSUB(-0.01)[]; MIME_TRACE(0.00)[0:+]; RCVD_COUNT_SEVEN(0.00)[9]; FORGED_SENDER_MAILLIST(0.00)[] X-TUID: YUBsEMPSLt4+ Vincent Legoll skribis: > * gnu/packages/bioinformatics.scm (gromacs): New variable. > * gnu/packages/patches/gromacs-tinyxml2.patch: New file... > * gnu/local.mk (dist_patch_DATA): ...add it here. I wonder if chemistry.scm would be more appropriate, WDYT? > --- /dev/null > +++ b/gnu/packages/patches/gromacs-tinyxml2.patch > @@ -0,0 +1,50 @@ Could you add one or two sentences at the top of the file explaining what it does and what its upstream status is? It=E2=80=99s not obvious why= the reference data needs to be adjusted as a consequence of unbundling tinyxml2. That=E2=80=99s it! Could you send updated patches? I=E2=80=99ll be happy to commit them. :-) Thank you for all the work! Ludo=E2=80=99.