* [bug#51509] [PATCH] doc: Mention Hg support for 'guix import cran' and some caveats.
@ 2021-10-30 11:03 Xinglu Chen
2021-11-27 9:17 ` Ricardo Wurmus
0 siblings, 1 reply; 3+ messages in thread
From: Xinglu Chen @ 2021-10-30 11:03 UTC (permalink / raw)
To: 51509; +Cc: Ricardo Wurmus
* guix.texi (Invoking guix import): Mention support for Mercurial repositories
for the CRAN importer, and some caveats with the Git and Mercurial backends.
---
Prompted by Ricardo’s comments on the “Accuracy of importers” thread:
<https://yhetil.org/guix-devel/87mtmq7pes.fsf@disroot.org/T/#mabff98d436895c18f177c4016792ec215f645bbf>
doc/guix.texi | 12 +++++++++---
1 file changed, 9 insertions(+), 3 deletions(-)
diff --git a/doc/guix.texi b/doc/guix.texi
index 22215214e0..661e29e69c 100644
--- a/doc/guix.texi
+++ b/doc/guix.texi
@@ -11852,14 +11852,20 @@
guix import cran --archive=bioconductor GenomicRanges
@end example
-Finally, you can also import R packages that have not yet been published on
-CRAN or Bioconductor as long as they are in a git repository. Use
-@option{--archive=git} followed by the URL of the git repository:
+Finally, you can also import R packages that have not yet been published
+on CRAN or Bioconductor as long as they are in a Git or Mercurial
+repository. Use @option{--archive=git} or @option{--archive=hg}
+followed by the URL of the repository:
@example
guix import cran --archive=git https://github.com/immunogenomics/harmony
@end example
+One limitation of this is that dependencies that are also hosted on Git
+or Mercurial repositories cannot be imported. Also, note that the
+@command{hg} executable has to be in the users's @env{PATH} for the
+Mercurial backend to work.
+
@item texlive
@cindex TeX Live
@cindex CTAN
base-commit: cd188b9c6f28bd907b625a5cd6c616d1d2529671
--
2.33.0
^ permalink raw reply related [flat|nested] 3+ messages in thread
* [bug#51509] [PATCH] doc: Mention Hg support for 'guix import cran' and some caveats.
2021-10-30 11:03 [bug#51509] [PATCH] doc: Mention Hg support for 'guix import cran' and some caveats Xinglu Chen
@ 2021-11-27 9:17 ` Ricardo Wurmus
2021-12-19 9:04 ` Xinglu Chen
0 siblings, 1 reply; 3+ messages in thread
From: Ricardo Wurmus @ 2021-11-27 9:17 UTC (permalink / raw)
To: Xinglu Chen; +Cc: 51509
Hi,
> * guix.texi (Invoking guix import): Mention support for
> Mercurial repositories
> for the CRAN importer, and some caveats with the Git and
> Mercurial backends.
> ---
> Prompted by Ricardo’s comments on the “Accuracy of importers”
> thread:
>
> <https://yhetil.org/guix-devel/87mtmq7pes.fsf@disroot.org/T/#mabff98d436895c18f177c4016792ec215f645bbf>
I’d prefer not to mention the limitation (as it’s an
rstudio-specific modification to DESCRIPTION files) and instead
work on supporting this extension to the DESCRIPTION file. I
already have some WIP to address this.
--
Ricardo
^ permalink raw reply [flat|nested] 3+ messages in thread
* [bug#51509] [PATCH] doc: Mention Hg support for 'guix import cran' and some caveats.
2021-11-27 9:17 ` Ricardo Wurmus
@ 2021-12-19 9:04 ` Xinglu Chen
0 siblings, 0 replies; 3+ messages in thread
From: Xinglu Chen @ 2021-12-19 9:04 UTC (permalink / raw)
To: Ricardo Wurmus; +Cc: 51509
[-- Attachment #1: Type: text/plain, Size: 1186 bytes --]
Hi,
On Sat, Nov 27 2021, Ricardo Wurmus wrote:
> Hi,
>
>> * guix.texi (Invoking guix import): Mention support for
>> Mercurial repositories
>> for the CRAN importer, and some caveats with the Git and
>> Mercurial backends.
>> ---
>> Prompted by Ricardo’s comments on the “Accuracy of importers”
>> thread:
>>
>> <https://yhetil.org/guix-devel/87mtmq7pes.fsf@disroot.org/T/#mabff98d436895c18f177c4016792ec215f645bbf>
>
> I’d prefer not to mention the limitation (as it’s an
> rstudio-specific modification to DESCRIPTION files) and instead
> work on supporting this extension to the DESCRIPTION file. I
> already have some WIP to address this.
Just to clarify, you are referring to the fact that the ‘--recursive’
option won’t work, not the fact that the ‘hg’ binary needs to be in
$PATH, right? In that case I will send a new reroll removing the
following sentence:
--8<---------------cut here---------------start------------->8---
+One limitation of this is that dependencies that are also hosted on Git
+or Mercurial repositories cannot be imported.
--8<---------------cut here---------------end--------------->8---
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^ permalink raw reply [flat|nested] 3+ messages in thread
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2021-10-30 11:03 [bug#51509] [PATCH] doc: Mention Hg support for 'guix import cran' and some caveats Xinglu Chen
2021-11-27 9:17 ` Ricardo Wurmus
2021-12-19 9:04 ` Xinglu Chen
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