* [bug#71344] [PATCH] gnu: Add r-rnacrosslinkoo.
@ 2024-06-03 15:18 Afkhami, Navid
2024-06-28 10:36 ` bug#71344: " Ricardo Wurmus
0 siblings, 1 reply; 2+ messages in thread
From: Afkhami, Navid @ 2024-06-03 15:18 UTC (permalink / raw)
To: 71344; +Cc: Afkhami, Navid
* gnu/packages/bioinformatics.scm (r-rnacrosslinkoo): New variable.
Change-Id: I1ca6dcef9c093627c3743d1176e587cf40053ba0
---
gnu/packages/bioinformatics.scm | 44 +++++++++++++++++++++++++++++++++
1 file changed, 44 insertions(+)
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index cdda029809..afdf818b07 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -13915,6 +13915,50 @@ (define-public r-raremetals2
trait.")
(license license:gpl3)))
+(define-public r-rnacrosslinkoo
+ (let ((commit "a317e0fa6ddf34c309529d57390769e2b2b5bfb7")
+ (revision "1"))
+ (package
+ (name "r-rnacrosslinkoo")
+ (version (git-version "0.1.3" revision commit))
+ (source
+ (origin
+ (method git-fetch)
+ (uri (git-reference
+ (url "https://github.com/cran/rnaCrosslinkOO")
+ (commit commit)))
+ (file-name (git-file-name name version))
+ (sha256
+ (base32 "0csv9924z0ish960k034qzv3gxh1yabnxni8hsrn5j6xl1r3cdpl"))))
+ (properties `((upstream-name . "rnaCrosslinkOO")))
+ (build-system r-build-system)
+ (propagated-inputs (list r-classdiscovery
+ r-doparallel
+ r-foreach
+ r-genomicranges
+ r-ggplot2
+ r-ggrepel
+ r-heatmap3
+ r-igraph
+ r-iranges
+ r-mass
+ r-mixtools
+ r-patchwork
+ r-r4rna
+ r-rcolorbrewer
+ r-reshape2
+ r-rrna
+ r-s4vectors
+ r-seqinr
+ r-tidyverse
+ r-topdom))
+ (native-inputs (list r-knitr))
+ (home-page "https://github.com/cran/rnaCrosslinkOO")
+ (synopsis "Analysis of RNA crosslinking data")
+ (description
+ "The package is ideal for analyzing RNA structure and chemical probing data.")
+ (license license:gpl3))))
+
(define-public r-rnaseqdtu
(let ((commit "5bee1e769d2e1dc6a3f1cecb78078050eeb5b9ac")
(revision "1"))
base-commit: 1615084a9a4115d48b75b3db048761e7534efc87
prerequisite-patch-id: 191a8394dbe6f865a9dc55bfc1b62e9dffc2180d
prerequisite-patch-id: 3ddb7b281335b1bb4ced1e60a1f243a12a5cba2b
prerequisite-patch-id: 23c7f331c5a70d80ff65f3b52bd29d19d87c5b8d
prerequisite-patch-id: a5f9464498560b3ba9ddb894482fc48a3a472d74
--
2.34.1
^ permalink raw reply related [flat|nested] 2+ messages in thread
* bug#71344: [PATCH] gnu: Add r-rnacrosslinkoo.
2024-06-03 15:18 [bug#71344] [PATCH] gnu: Add r-rnacrosslinkoo Afkhami, Navid
@ 2024-06-28 10:36 ` Ricardo Wurmus
0 siblings, 0 replies; 2+ messages in thread
From: Ricardo Wurmus @ 2024-06-28 10:36 UTC (permalink / raw)
To: 71344-done
Applied, thank you!
--
Ricardo
^ permalink raw reply [flat|nested] 2+ messages in thread
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2024-06-03 15:18 [bug#71344] [PATCH] gnu: Add r-rnacrosslinkoo Afkhami, Navid
2024-06-28 10:36 ` bug#71344: " Ricardo Wurmus
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