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i="5.92,226,1650924000"; d="scan'208,223"; a="72172475" From: Thread-Topic: [PATCH] fenics: Do not use mpirun for tests Thread-Index: AQHYihiDt/XO5z75+U2c/n1SP0a9PA== Date: Mon, 27 Jun 2022 11:24:49 +0000 Message-ID: <87bkuefiwu.fsf@dlr.de> Accept-Language: de-DE, en-US Content-Language: en-US X-MS-Has-Attach: yes X-MS-TNEF-Correlator: Content-Type: multipart/mixed; boundary="_002_87bkuefiwufsfdlrde_" MIME-Version: 1.0 Received-SPF: pass client-ip=194.94.201.12; envelope-from=Ontje.Luensdorf@dlr.de; helo=mailin.dlr.de X-Spam_score_int: -43 X-Spam_score: -4.4 X-Spam_bar: ---- X-Spam_report: (-4.4 / 5.0 requ) BAYES_00=-1.9, DKIM_SIGNED=0.1, DKIM_VALID=-0.1, DKIM_VALID_AU=-0.1, DKIM_VALID_EF=-0.1, RCVD_IN_DNSWL_MED=-2.3, SPF_HELO_NONE=0.001, SPF_PASS=-0.001, T_SCC_BODY_TEXT_LINE=-0.01 autolearn=ham autolearn_force=no X-Spam_action: no action X-Mailman-Approved-At: Mon, 27 Jun 2022 08:31:51 -0400 X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list X-BeenThere: guix-patches@gnu.org List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: guix-patches-bounces+larch=yhetil.org@gnu.org Sender: "Guix-patches" X-Migadu-Flow: FLOW_IN X-Migadu-To: larch@yhetil.org X-Migadu-Country: US ARC-Message-Signature: i=1; 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aspmx1.migadu.com; dkim=fail ("headers rsa verify failed") header.d=dlr.de header.s=052022 header.b="F/K6l5yd"; dmarc=none; spf=pass (aspmx1.migadu.com: domain of "guix-patches-bounces+larch=yhetil.org@gnu.org" designates 209.51.188.17 as permitted sender) smtp.mailfrom="guix-patches-bounces+larch=yhetil.org@gnu.org" X-Migadu-Spam-Score: 1.75 Authentication-Results: aspmx1.migadu.com; dkim=fail ("headers rsa verify failed") header.d=dlr.de header.s=052022 header.b="F/K6l5yd"; dmarc=none; spf=pass (aspmx1.migadu.com: domain of "guix-patches-bounces+larch=yhetil.org@gnu.org" designates 209.51.188.17 as permitted sender) smtp.mailfrom="guix-patches-bounces+larch=yhetil.org@gnu.org" X-Migadu-Queue-Id: D63C0463E8 X-Spam-Score: 1.75 X-Migadu-Scanner: scn1.migadu.com X-TUID: LuO2j6LgdXvJ --_002_87bkuefiwufsfdlrde_ Content-Type: text/plain; charset="iso-8859-1" Content-Transfer-Encoding: quoted-printable Hi guix, the fenics package tests fail and it looks like the tests are run 3 times concurrently. Every test name is printed three times in the build log, for example here: https://ci.guix.gnu.org/build/1039880/log/raw This is the maximum number of parallel jobs of the test run and if I increase it, I get more print outputs. AFAIK, pytest doesn't support mpi, so I don't see why the tests are executed this way. Anyhow, in the attached patch, the tests are executed directly using pytest. This prevents the tests from getting stuck and subsequently I discovered a failure in XDMF tests. With this test also disabled, the package builds fine for me. Maybe a fenics or mpi expert can tell if this patch makes sense? Best regards, Ontje --_002_87bkuefiwufsfdlrde_ Content-Type: text/x-patch; name="0001-gnu-fenics-Do-not-mpirun-tests.patch" Content-Description: 0001-gnu-fenics-Do-not-mpirun-tests.patch Content-Disposition: attachment; filename="0001-gnu-fenics-Do-not-mpirun-tests.patch"; size=2010; creation-date="Mon, 27 Jun 2022 11:24:49 GMT"; modification-date="Mon, 27 Jun 2022 11:24:49 GMT" Content-ID: Content-Transfer-Encoding: base64 RnJvbSA4ZGQxMTU5Njg1MWFiNWE3YWUxZDQ4M2I5ODgzODk0YTliZDRkNGJhIE1vbiBTZXAgMTcg MDA6MDA6MDAgMjAwMQ0KRnJvbTogPT9VVEYtOD9xP09udGplPTIwTD1DMz1CQ25zZG9yZj89IDxv bnRqZS5sdWVuc2RvcmZAZGxyLmRlPg0KRGF0ZTogTW9uLCAyNyBKdW4gMjAyMiAxMTo1MToxMCAr MDIwMA0KU3ViamVjdDogW1BBVENIXSBnbnU6IGZlbmljczogRG8gbm90IG1waXJ1biB0ZXN0cy4N Cg0KKiBnbnUvcGFja2FnZXMvc2ltdWxhdGlvbi5zY20gKGZlbmljcylbcGhhc2VzXTogRG8gbm90 IHVzZSBtcGlydW4gZm9yIHRlc3RzDQogIGFuZCBza2lwIGZhaWxpbmcgWERNRiB0ZXN0Lg0KLS0t DQogZ251L3BhY2thZ2VzL3NpbXVsYXRpb24uc2NtIHwgMTcgKysrKysrKystLS0tLS0tLS0NCiAx IGZpbGUgY2hhbmdlZCwgOCBpbnNlcnRpb25zKCspLCA5IGRlbGV0aW9ucygtKQ0KDQpkaWZmIC0t Z2l0IGEvZ251L3BhY2thZ2VzL3NpbXVsYXRpb24uc2NtIGIvZ251L3BhY2thZ2VzL3NpbXVsYXRp b24uc2NtDQppbmRleCA5ZTkyZmJjYzViLi5kZjRkZDJkMTdhIDEwMDY0NA0KLS0tIGEvZ251L3Bh Y2thZ2VzL3NpbXVsYXRpb24uc2NtDQorKysgYi9nbnUvcGFja2FnZXMvc2ltdWxhdGlvbi5zY20N CkBAIC02NjUsMTUgKzY2NSwxNCBAQCAoZGVmaW5lLXB1YmxpYyBmZW5pY3MNCiAgICAgICAgICAg IChsYW1iZGEqICgjOmtleSB0ZXN0cz8gIzphbGxvdy1vdGhlci1rZXlzKQ0KICAgICAgICAgICAg ICAod2hlbiB0ZXN0cz8NCiAgICAgICAgICAgICAgICAod2l0aC1kaXJlY3RvcnktZXhjdXJzaW9u ICJ0ZXN0Ig0KLSAgICAgICAgICAgICAgICAgOzsgTm90ZTogVGhlIHRlc3QgdGVzdF9zbmVzX3Nl dF9mcm9tX29wdGlvbnMoKSBpbiB0aGUgZmlsZQ0KLSAgICAgICAgICAgICAgICAgOzsgdW5pdC9u bHMvdGVzdF9QRVRTY1NORVNfc29sdmVyLnB5IGZhaWxzIGFuZCBpcyBpZ25vcmVkLg0KLSAgICAg ICAgICAgICAgICAgOzsgTGltaXQgdGhlIG51bWJlciBvZiBqb2JzIHRvIDMgYXMgNTAwIE1pQiBv ZiBtZW1vcnkgaXMgdXNlZA0KLSAgICAgICAgICAgICAgICAgOzsgcGVyIHByb2Nlc3MuDQotICAg ICAgICAgICAgICAgICAoaW52b2tlICJtcGlydW4iICItbnAiIChudW1iZXItPnN0cmluZw0KLSAg ICAgICAgICAgICAgICAgICAgICAgICAgICAgICAgICAgICAgICAgKG1pbiAzIChwYXJhbGxlbC1q b2ItY291bnQpKSkNCi0gICAgICAgICAgICAgICAgICAgICAgICAgInB5dGhvbiIgIi1CIiAiLW0i DQotICAgICAgICAgICAgICAgICAgICAgICAgICJweXRlc3QiICJ1bml0IiAiLS1pZ25vcmUiDQot ICAgICAgICAgICAgICAgICAgICAgICAgICJ1bml0L25scy90ZXN0X1BFVFNjU05FU19zb2x2ZXIu cHkiKSkpKSkNCisgICAgICAgICAgICAgICAgIChpbnZva2UNCisgICAgICAgICAgICAgICAgICAi cHl0ZXN0IiAidW5pdCINCisgICAgICAgICAgICAgICAgICA7OyBUaGUgdGVzdCB0ZXN0X3NuZXNf c2V0X2Zyb21fb3B0aW9ucygpIGluIHRoZSBmaWxlDQorICAgICAgICAgICAgICAgICAgOzsgdW5p dC9ubHMvdGVzdF9QRVRTY1NORVNfc29sdmVyLnB5IGZhaWxzIGFuZCBpcyBpZ25vcmVkLg0KKyAg ICAgICAgICAgICAgICAgICItLWlnbm9yZSIgInVuaXQvbmxzL3Rlc3RfUEVUU2NTTkVTX3NvbHZl ci5weSINCisgICAgICAgICAgICAgICAgICA7OyBGYWlscyB3aXRoIGEgc2VnZmF1bHQuDQorICAg ICAgICAgICAgICAgICAgIi0taWdub3JlIiAidW5pdC9pby90ZXN0X1hETUYucHkiDQorICAgICAg ICAgICAgICAgICAgKSkpKSkNCiAgICAgICAgICAoYWRkLWFmdGVyICdpbnN0YWxsICdpbnN0YWxs LWRlbW8tZmlsZXMNCiAgICAgICAgICAgIChsYW1iZGEqICgjOmtleSBvdXRwdXRzICM6YWxsb3ct b3RoZXIta2V5cykNCiAgICAgICAgICAgICAgKGxldCogKChkZW1vcyAoc3RyaW5nLWFwcGVuZA0K DQpiYXNlLWNvbW1pdDogOTc3NjYzMjNiYzZlMmI0ZGNmYmE0ZDZiNDY3NDlhNDI4MGJjYTcwOQ0K LS0gDQoyLjM2LjENCg0K --_002_87bkuefiwufsfdlrde_--