From mboxrd@z Thu Jan 1 00:00:00 1970 Return-Path: Received: from mp2 ([2001:41d0:2:4a6f::]) (using TLSv1.3 with cipher TLS_AES_256_GCM_SHA384 (256/256 bits)) by ms11 with LMTPS id uia5MLK7ml//NwAA0tVLHw (envelope-from ) for ; Thu, 29 Oct 2020 12:55:14 +0000 Received: from aspmx1.migadu.com ([2001:41d0:2:4a6f::]) (using TLSv1.3 with cipher TLS_AES_256_GCM_SHA384 (256/256 bits)) by mp2 with LMTPS id gGcALLK7ml8VPgAAB5/wlQ (envelope-from ) for ; Thu, 29 Oct 2020 12:55:14 +0000 Received: from lists.gnu.org (lists.gnu.org [209.51.188.17]) (using TLSv1.2 with cipher ECDHE-RSA-AES256-GCM-SHA384 (256/256 bits)) (No client certificate requested) by aspmx1.migadu.com (Postfix) with ESMTPS id 9F3CE9402A0 for ; Thu, 29 Oct 2020 12:55:13 +0000 (UTC) Received: from localhost ([::1]:34444 helo=lists1p.gnu.org) by lists.gnu.org with esmtp (Exim 4.90_1) (envelope-from ) id 1kY7SS-0007hR-E3 for larch@yhetil.org; Thu, 29 Oct 2020 08:55:12 -0400 Received: from eggs.gnu.org ([2001:470:142:3::10]:60538) by lists.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from ) id 1kY7SI-0007h7-FD for guix-patches@gnu.org; Thu, 29 Oct 2020 08:55:02 -0400 Received: from debbugs.gnu.org ([209.51.188.43]:40800) by eggs.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_128_GCM_SHA256:128) (Exim 4.90_1) (envelope-from ) id 1kY7SI-00059Y-5t for guix-patches@gnu.org; Thu, 29 Oct 2020 08:55:02 -0400 Received: from Debian-debbugs by debbugs.gnu.org with local (Exim 4.84_2) (envelope-from ) id 1kY7SI-00016e-51 for guix-patches@gnu.org; Thu, 29 Oct 2020 08:55:02 -0400 X-Loop: help-debbugs@gnu.org Subject: [bug#44304] [PATCH] gnu: Update htslib to 1.11. Resent-From: Ricardo Wurmus Original-Sender: "Debbugs-submit" Resent-CC: guix-patches@gnu.org Resent-Date: Thu, 29 Oct 2020 12:55:02 +0000 Resent-Message-ID: Resent-Sender: help-debbugs@gnu.org X-GNU-PR-Message: followup 44304 X-GNU-PR-Package: guix-patches X-GNU-PR-Keywords: patch To: Roel Janssen Cc: 44304@debbugs.gnu.org X-Debbugs-Original-Cc: 44304@debbugs.gnu.org, guix-patches@gnu.org Received: via spool by submit@debbugs.gnu.org id=B.16039760474166 (code B ref -1); Thu, 29 Oct 2020 12:55:02 +0000 Received: (at submit) by debbugs.gnu.org; 29 Oct 2020 12:54:07 +0000 Received: from localhost ([127.0.0.1]:52344 helo=debbugs.gnu.org) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1kY7RO-000157-U7 for submit@debbugs.gnu.org; Thu, 29 Oct 2020 08:54:07 -0400 Received: from lists.gnu.org ([209.51.188.17]:50732) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1kY7RN-00014v-U3 for submit@debbugs.gnu.org; Thu, 29 Oct 2020 08:54:06 -0400 Received: from eggs.gnu.org ([2001:470:142:3::10]:60300) by lists.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from ) id 1kY7RN-0007NH-Le for guix-patches@gnu.org; Thu, 29 Oct 2020 08:54:05 -0400 Received: from sender4-of-o51.zoho.com ([136.143.188.51]:21150) by eggs.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from ) id 1kY7RH-0004oq-T0; Thu, 29 Oct 2020 08:54:05 -0400 ARC-Seal: i=1; a=rsa-sha256; t=1603976035; cv=none; d=zohomail.com; s=zohoarc; b=GV5HvG7o5M5Aij2u/ihiqk8i5XrG93u1StnoAo07+8kEfgT8Lt4B96ssZkw0A8Exhl33PpZcxnbS/F3KMfemJuCgwJgTPtwfAZwFyYWVNM87m5Bm6zeT9oujHfrkzOh+I3VEGvUWcJ5clI0nmNgv5ukRFHXc0mYa/+eMHg527Rg= ARC-Message-Signature: i=1; a=rsa-sha256; c=relaxed/relaxed; d=zohomail.com; s=zohoarc; t=1603976035; h=Content-Type:Cc:Date:From:In-Reply-To:MIME-Version:Message-ID:References:Subject:To; bh=GhufQFQgVCptJ4sUrnNLAIGG9voIXodhl6hRtINypp4=; b=fDAT40UwcKfuN1pOvEbHACrblXNGg0jK8++caAJQe8orgi0RS+uvQutfGoDPI8LLBvs9pgimgukcOU2pwKeMCwmWxGRNig8csImk+NgdEc+pVoBuBd01zF/AXWle0aceXWZwvNbNoor4dN8NH1WepuNIdH2ZPW9IT7tVAT6RB3M= ARC-Authentication-Results: i=1; mx.zohomail.com; dkim=pass header.i=elephly.net; spf=pass smtp.mailfrom=rekado@elephly.net; dmarc=pass header.from= header.from= DKIM-Signature: v=1; a=rsa-sha256; q=dns/txt; c=relaxed/relaxed; t=1603976035; s=zoho; d=elephly.net; i=rekado@elephly.net; h=References:From:To:Cc:Subject:In-reply-to:Date:Message-ID:MIME-Version:Content-Type; bh=GhufQFQgVCptJ4sUrnNLAIGG9voIXodhl6hRtINypp4=; b=T+Hi/OJT/TvzxEGMRfawE5yNLCwtrBHgNXcSbOcL8/3YU5FGokHcCdsV2lPhauRI 9QA1vQDKSWKvkyLMYXLqi13FAK2yASFeHMW/8jqkhh8bU//E4ukIAuaNi1x1wDCVpdD QF4JJhQr6GecqJb6KtaUlfJNF9NkJXwZWGHRbrXA= Received: from localhost (p54ad4c9e.dip0.t-ipconnect.de [84.173.76.158]) by mx.zohomail.com with SMTPS id 1603976033043947.8466495088402; Thu, 29 Oct 2020 05:53:53 -0700 (PDT) References: <6ccd23fc29b49611b82d9cc26461dfc294796aa3.camel@gnu.org> <08b421af5c82326cae13054e014e926b6b3c4ece.camel@gnu.org> User-agent: mu4e 1.4.13; emacs 27.1 From: Ricardo Wurmus In-reply-to: <08b421af5c82326cae13054e014e926b6b3c4ece.camel@gnu.org> X-URL: https://elephly.net X-PGP-Key: https://elephly.net/rekado.pubkey X-PGP-Fingerprint: BCA6 89B6 3655 3801 C3C6 2150 197A 5888 235F ACAC Date: Thu, 29 Oct 2020 13:55:42 +0100 Message-ID: <877dr9199t.fsf@elephly.net> MIME-Version: 1.0 Content-Type: text/plain X-ZohoMailClient: External Received-SPF: pass client-ip=136.143.188.51; envelope-from=rekado@elephly.net; helo=sender4-of-o51.zoho.com X-detected-operating-system: by eggs.gnu.org: First seen = 2020/10/29 08:53:56 X-ACL-Warn: Detected OS = Linux 3.11 and newer [fuzzy] X-Spam_score_int: -20 X-Spam_score: -2.1 X-Spam_bar: -- X-Spam_report: (-2.1 / 5.0 requ) BAYES_00=-1.9, DKIM_SIGNED=0.1, DKIM_VALID=-0.1, DKIM_VALID_AU=-0.1, DKIM_VALID_EF=-0.1, RCVD_IN_DNSWL_NONE=-0.0001, RCVD_IN_MSPIKE_H2=-0.001, SPF_HELO_NONE=0.001, SPF_PASS=-0.001 autolearn=ham autolearn_force=no X-Spam_action: no action X-Spam-Score: -1.3 (-) X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list X-Spam-Score: -2.3 (--) X-BeenThere: guix-patches@gnu.org List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: guix-patches-bounces+larch=yhetil.org@gnu.org Sender: "Guix-patches" X-Scanner: scn0 Authentication-Results: aspmx1.migadu.com; dkim=fail (rsa verify failed) header.d=elephly.net header.s=zoho header.b=T+Hi/OJT; dmarc=none; spf=pass (aspmx1.migadu.com: domain of guix-patches-bounces@gnu.org designates 209.51.188.17 as permitted sender) smtp.mailfrom=guix-patches-bounces@gnu.org X-Spam-Score: 1.99 X-TUID: 3CkPjHhShr91 Roel Janssen writes: > On Thu, 2020-10-29 at 11:44 +0100, Roel Janssen wrote: >> Dear Guix, >> >> I'd like to update htslib to 1.11. The patch is straightfoward. >> >> Kind regards, >> Roel Janssen > > In addition to htslib, it'd be good to keep samtools and bcftools in > sync. So here are the patches for bcftools and samtools. These patches look good to me! -- Ricardo