unofficial mirror of guix-patches@gnu.org 
 help / color / mirror / code / Atom feed
* [bug#54887] [PATCH] gnu: Add r-abarray.
@ 2022-04-12 16:15 Mădălin Ionel Patrașcu
  2022-04-14 11:25 ` bug#54887: " Ricardo Wurmus
  0 siblings, 1 reply; 2+ messages in thread
From: Mădălin Ionel Patrașcu @ 2022-04-12 16:15 UTC (permalink / raw)
  To: 54887

* gnu/packages/bioconductor.scm (r-abarray): New variable.
---
 gnu/packages/bioconductor.scm | 26 ++++++++++++++++++++++++++
 1 file changed, 26 insertions(+)

diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
index 803437a033..fffbf3da87 100644
--- a/gnu/packages/bioconductor.scm
+++ b/gnu/packages/bioconductor.scm
@@ -1139,6 +1139,32 @@ (define-public r-abadata
 All datasets are restricted to protein coding genes.")
     (license license:gpl2+)))
 
+(define-public r-abarray
+  (package
+    (name "r-abarray")
+    (version "1.62.0")
+    (source (origin
+              (method url-fetch)
+              (uri (bioconductor-uri "ABarray" version))
+              (sha256
+               (base32
+                "0yh7jmkwdg3kmm98ii0cxbla3s5bwy84fpg6xcpggsrriwzwfb5k"))))
+    (properties `((upstream-name . "ABarray")))
+    (build-system r-build-system)
+    (propagated-inputs (list r-biobase r-multtest))
+    (home-page "https://bioconductor.org/packages/ABarray")
+    (synopsis
+     "Gene expression analysis for Applied Biosystems Genome Survey Microarray")
+    (description
+     "The package @code{ABarray} is designed to work with Applied Biosystems
+whole genome microarray platform, as well as any other platform whose data can
+be transformed into expression data matrix.  Functions include data
+preprocessing, filtering, control probe analysis, statistical analysis in one
+single function.  A @dfn{graphical user interface} (GUI) is also provided.  The
+raw data, processed data, graphics output and statistical results are organized
+into folders according to the analysis settings used.")
+    (license license:gpl2+)))
+
 (define-public r-aneufinderdata
   (package
    (name "r-aneufinderdata")
-- 
2.34.0





^ permalink raw reply related	[flat|nested] 2+ messages in thread

* bug#54887: [PATCH] gnu: Add r-abarray.
  2022-04-12 16:15 [bug#54887] [PATCH] gnu: Add r-abarray Mădălin Ionel Patrașcu
@ 2022-04-14 11:25 ` Ricardo Wurmus
  0 siblings, 0 replies; 2+ messages in thread
From: Ricardo Wurmus @ 2022-04-14 11:25 UTC (permalink / raw)
  To: 54887-done

Applied, thanks!

-- 
Ricardo




^ permalink raw reply	[flat|nested] 2+ messages in thread

end of thread, other threads:[~2022-04-14 11:27 UTC | newest]

Thread overview: 2+ messages (download: mbox.gz follow: Atom feed
-- links below jump to the message on this page --
2022-04-12 16:15 [bug#54887] [PATCH] gnu: Add r-abarray Mădălin Ionel Patrașcu
2022-04-14 11:25 ` bug#54887: " Ricardo Wurmus

Code repositories for project(s) associated with this public inbox

	https://git.savannah.gnu.org/cgit/guix.git

This is a public inbox, see mirroring instructions
for how to clone and mirror all data and code used for this inbox;
as well as URLs for read-only IMAP folder(s) and NNTP newsgroup(s).