[bug#59344] [PATCH 0/3] gnu: WIP Add cl-graph

[bug#59344] [PATCH 0/3] gnu: WIP Add cl-graph

[Sharlatan Hellseher]

Hi Guix team!

This patch series includes last inputs for cl-graph, but not cl-graph itself
as build phase failes with error:

> Unhandled SB-INT:SIMPLE-FILE-ERROR in thread #<SB-THREAD:THREAD "main thread" RUNNING
>                                                 {100B108083}>:
>   Error opening #P"/gnu/store/718rs4smnilaf2fhf4mqbxlkc4qicka3-sbcl-cl-containers-0.12.1-3.3d1df53/lib/common-lisp/sbcl/cl-containers/dev/utilities-integration-tmp1CXFJSK9.fasl":
> 
>     Permission denied

I've got WIP package in my personal repo
https://git.sr.ht/~hellseher/ffab/tree/main/item/ffab/packages/lisp-xyz.scm#L265,
I'll to figure out why it's failing, but if anyone may take a look it would be
great too!

> ./pre-inst-env guix build cl-asdf-system-connections cl-metacopy sbcl-cl-mathstats sbcl-asdf-system-connections sbcl-metacopy ecl-cl-mathstats ecl-asdf-system-connections ecl-cl-mathstats --rounds=2
> /gnu/store/0cj01ffnbhvrm8kaw4mi81xh92mv6v32-ecl-cl-mathstats-0.8.2-1.4df38ea
> /gnu/store/jylgizsq3gv16024jfd54z71ygkbn10a-ecl-asdf-system-connections-0.8.4-1.9f08524
> /gnu/store/0cj01ffnbhvrm8kaw4mi81xh92mv6v32-ecl-cl-mathstats-0.8.2-1.4df38ea
> /gnu/store/cg5iip9ncl345wxc9n34zpraswkznb8a-sbcl-metacopy-0.2.0-1.1b5bf44
> /gnu/store/lmmv8r7rzkfs7why6wlgbz9dg6rg4cf2-sbcl-asdf-system-connections-0.8.4-1.9f08524
> /gnu/store/lnq9a5rq4clfx7w6hvjwj14h7i7adqyi-sbcl-cl-mathstats-0.8.2-1.4df38ea
> /gnu/store/8k7hljl0fvk7qg23443sq4llsv7q6sy1-cl-metacopy-0.2.0-1.1b5bf44
> /gnu/store/s9vhj3sf645ydi9vadmjfbm79nwj07yi-cl-asdf-system-connections-0.8.4-1.9f08524

Sharlatan Hellseher (3):
  gnu: Add cl-asdf-system-connections
  gnu: Add cl-metacopy
  gnu: Add sbcl-cl-mathstats

 gnu/packages/lisp-xyz.scm | 94 +++++++++++++++++++++++++++++++++++++++
 1 file changed, 94 insertions(+)


base-commit: 83c9e00ffbd41776c003f6992e9d613a5434fff9
prerequisite-patch-id: 679d60737b0daafbb9c5e2db480ac538b59d5889
-- 
2.38.0

[bug#59344] [PATCH 1/3] gnu: Add cl-asdf-system-connections

[Sharlatan Hellseher]

* gnu/packages/lisp-xyz.scm (cl-asdf-system-connections,
  ecl-asdf-system-connections, sbcl-asdf-system-connections): New variables.
---
 gnu/packages/lisp-xyz.scm | 28 ++++++++++++++++++++++++++++
 1 file changed, 28 insertions(+)

diff --git a/gnu/packages/lisp-xyz.scm b/gnu/packages/lisp-xyz.scm
index 45fcb108f0..8df8579111 100644
--- a/gnu/packages/lisp-xyz.scm
+++ b/gnu/packages/lisp-xyz.scm
@@ -616,6 +616,34 @@ (define-public ecl-asdf-finalizers
 (define-public cl-asdf-finalizers
   (sbcl-package->cl-source-package sbcl-asdf-finalizers))
 
+(define-public sbcl-asdf-system-connections
+  (let ((commit "9f085240febccccff99d9d3bb687fcaafffd3f5e")
+        (revision "1"))
+    (package
+      (name "sbcl-asdf-system-connections")
+      (version (git-version "0.8.4" revision commit))
+      (source
+       (origin
+         (method git-fetch)
+         (uri (git-reference
+               (url "https://github.com/gwkkwg/asdf-system-connections")
+               (commit commit)))
+         (file-name (git-file-name "asdf-system-connections" version))
+         (sha256
+          (base32 "06kg0m8bv383qq3r34x0f8hz6p6zxcw02qn7kj960vcnrp5a5b3y"))))
+      (build-system asdf-build-system/sbcl)
+      (home-page "https://github.com/gwkkwg/asdf-system-connections")
+      (synopsis "Common Lisp ASDF system auto-loading extantion")
+      (description "This package povides Common Lisp ASDF system auto-loading
+extantion.")
+      (license license:expat))))
+
+(define-public ecl-asdf-system-connections
+  (sbcl-package->ecl-package sbcl-asdf-system-connections))
+
+(define-public cl-asdf-system-connections
+  (sbcl-package->cl-source-package sbcl-asdf-system-connections))
+
 (define-public sbcl-net.didierverna.asdf-flv
   (package
     (name "sbcl-net.didierverna.asdf-flv")
-- 
2.38.0

[bug#59344] [PATCH 2/3] gnu: Add cl-metacopy

[Sharlatan Hellseher]

* gnu/packages/lisp-xyz.scm (cl-metacopy, sbcl-metacopy): New variables.
---
 gnu/packages/lisp-xyz.scm | 34 ++++++++++++++++++++++++++++++++++
 1 file changed, 34 insertions(+)

diff --git a/gnu/packages/lisp-xyz.scm b/gnu/packages/lisp-xyz.scm
index 8df8579111..9e5d5e76d8 100644
--- a/gnu/packages/lisp-xyz.scm
+++ b/gnu/packages/lisp-xyz.scm
@@ -17996,6 +17996,40 @@ (define-public ecl-simple-inferiors
 (define-public cl-simple-inferiors
   (sbcl-package->cl-source-package sbcl-simple-inferiors))
 
+(define-public sbcl-metacopy
+  (let ((commit "1b5bf443206cc1dea7801ae23d1167bd02122d30")
+        (revision "1"))
+    (package
+      (name "sbcl-metacopy")
+      (version (git-version "0.2.0" revision commit))
+      (source
+       (origin
+         (method git-fetch)
+         (uri (git-reference
+               (url "https://github.com/gwkkwg/metacopy")
+               (commit commit)))
+         (file-name (git-file-name name version))
+         (sha256
+          (base32 "1rzp112djgw5n76s6hy2aq92bc43p0zd5bgzvqwvgvws4pls42s9"))))
+      (build-system asdf-build-system/sbcl)
+      (native-inputs
+       (list sbcl-lift sbcl-asdf-system-connections))
+      (inputs
+       (list sbcl-contextl sbcl-moptilities))
+      (home-page "https://github.com/gwkkwg/metacopy")
+      (synopsis "Flexible Common Lisp shallow/deep copy mechanism")
+      (description
+       "This package provides flexible Common Lisp shallow/deep copy mechanism.")
+      (license license:expat))))
+
+;; NOTE: (Sharlatan-20221112T214131+0000): There is no ecl-moptilities variable
+;; required for tests.
+;;
+;; ecl-metacopy
+
+(define-public cl-metacopy
+  (sbcl-package->cl-source-package sbcl-metacopy))
+
 (define-public sbcl-legit
   (let ((commit "5f8a2d4c4f5fb8e53340eeef600433ee20e03fbe")
         (revision "2"))
-- 
2.38.0

[bug#59344] [PATCH 3/3] gnu: Add sbcl-cl-mathstats

[Sharlatan Hellseher]

* gnu/packages/lisp-xyz.scm (cl-mathstats, ecl-cl-mathstats,
  sbcl-cl-mathstats): New variables.
---
 gnu/packages/lisp-xyz.scm | 32 ++++++++++++++++++++++++++++++++
 1 file changed, 32 insertions(+)

diff --git a/gnu/packages/lisp-xyz.scm b/gnu/packages/lisp-xyz.scm
index 9e5d5e76d8..1c63f12c39 100644
--- a/gnu/packages/lisp-xyz.scm
+++ b/gnu/packages/lisp-xyz.scm
@@ -16508,6 +16508,38 @@ (define-public ecl-bodge-math
 (define-public cl-bodge-math
   (sbcl-package->cl-source-package sbcl-bodge-math))
 
+(define-public sbcl-cl-mathstats
+  (let ((commit "4df38ea1b9de069cf939919253565a9ca9538eca")
+        (revision "1"))
+    (package
+      (name "sbcl-cl-mathstats")
+      (version (git-version "0.8.2" revision commit))
+      (source
+       (origin
+         (method git-fetch)
+         (uri (git-reference
+               (url "https://github.com/gwkkwg/cl-mathstats")
+               (commit commit)))
+         (file-name (git-file-name "cl-mathstats" version))
+         (sha256
+          (base32 "0gsjvmkmnxc4hp5z9mkm5vsllywqyg7kx8jgz88vnx47yj3va1s8"))))
+      (build-system asdf-build-system/sbcl)
+      (native-inputs
+       (list sbcl-lift))
+      (inputs
+       (list sbcl-cl-containers sbcl-metatilities-base))
+      (home-page "https://github.com/gwkkwg/cl-mathstats")
+      (synopsis "Common Lisp collection of mathematical routines")
+      (description
+       "This package provides Common Lisp math and statistics routines.")
+      (license license:expat))))
+
+(define-public ecl-cl-mathstats
+  (sbcl-package->ecl-package sbcl-cl-mathstats))
+
+(define-public cl-mathstats
+  (sbcl-package->cl-source-package sbcl-cl-mathstats))
+
 (define-public sbcl-bodge-blobs-support
   (let ((commit "c5034ca5f4fc3a44dbadeba215a09afd59a404b0")
         (revision "1"))
-- 
2.38.0

[bug#59344] [PATCH 0/3] gnu: WIP Add cl-graph

[Guillaume Le Vaillant]

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Sharlatan Hellseher <sharlatanus@gmail.com> skribis:

> Hi Guix team!
>
> This patch series includes last inputs for cl-graph, but not cl-graph itself
> as build phase failes with error:
>
>> Unhandled SB-INT:SIMPLE-FILE-ERROR in thread #<SB-THREAD:THREAD "main thread" RUNNING
>>                                                 {100B108083}>:
>>   Error opening #P"/gnu/store/718rs4smnilaf2fhf4mqbxlkc4qicka3-sbcl-cl-containers-0.12.1-3.3d1df53/lib/common-lisp/sbcl/cl-containers/dev/utilities-integration-tmp1CXFJSK9.fasl":
>> 
>>     Permission denied
>
> I've got WIP package in my personal repo
> https://git.sr.ht/~hellseher/ffab/tree/main/item/ffab/packages/lisp-xyz.scm#L265,
> I'll to figure out why it's failing, but if anyone may take a look it would be
> great too!

Patches 1 to 3 pushed as 89ebe054c5c32a6bb751548addda6fd31a27d099 and following.

Concerning cl-graph, it looks like it wants an optional subsystem of
cl-containers which is not compiled currently. Adding
cl-containers/with-moptilities and/or cl-containers/with-utilities and/or
cl-containers/with-variates to the 'asd-systems' argument in the package
definition of cl-containers should solve the issue.

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[bug#59344] [PATCH 0/3] gnu: WIP Add cl-graph

[Sharlatan Hellseher]

Hi Guillaume,

Thanks for your pointing that out! It looks like I've fixed the build now:

> ./pre-inst-env guix build sbcl-cl-graph cl-graph sbcl-cl-containers cl-containers --rounds=2
> /gnu/store/xhcp5b79i332941219zdqh1pxnvbsvfp-cl-containers-0.12.1-4.3d1df53
> /gnu/store/iqbfp67yfa4dnkwq0fywfi84bmdgqcml-sbcl-cl-containers-0.12.1-4.3d1df53
> /gnu/store/nl7ykdxb1zzbq1qx387bd7iknay1s5h8-cl-graph-0.10.2-1.3cb7867
> /gnu/store/5r9jqnvr6nx4qhc37f3vda54am85ds07-sbcl-cl-graph-0.10.2-1.3cb7867

On Fri, 18 Nov 2022 at 13:51, Guillaume Le Vaillant <glv@posteo.net> wrote:
>
> Sharlatan Hellseher <sharlatanus@gmail.com> skribis:
>
> > Hi Guix team!
> >
> > This patch series includes last inputs for cl-graph, but not cl-graph itself
> > as build phase failes with error:
> >
> >> Unhandled SB-INT:SIMPLE-FILE-ERROR in thread #<SB-THREAD:THREAD "main thread" RUNNING
> >>                                                 {100B108083}>:
> >>   Error opening #P"/gnu/store/718rs4smnilaf2fhf4mqbxlkc4qicka3-sbcl-cl-containers-0.12.1-3.3d1df53/lib/common-lisp/sbcl/cl-containers/dev/utilities-integration-tmp1CXFJSK9.fasl":
> >>
> >>     Permission denied
> >
> > I've got WIP package in my personal repo
> > https://git.sr.ht/~hellseher/ffab/tree/main/item/ffab/packages/lisp-xyz.scm#L265,
> > I'll to figure out why it's failing, but if anyone may take a look it would be
> > great too!
>
> Patches 1 to 3 pushed as 89ebe054c5c32a6bb751548addda6fd31a27d099 and following.
>
> Concerning cl-graph, it looks like it wants an optional subsystem of
> cl-containers which is not compiled currently. Adding
> cl-containers/with-moptilities and/or cl-containers/with-utilities and/or
> cl-containers/with-variates to the 'asd-systems' argument in the package
> definition of cl-containers should solve the issue.



-- 

… наш разум - превосходная объяснительная машина которая способна
найти смысл почти в чем угодно, истолковать любой феномен, но
совершенно не в состоянии принять мысль о непредсказуемости.

[bug#59344] [PATCH 1/2] gnu: cl-containers: Fix build for all systems

[Sharlatan Hellseher]

From cl-containers.asd:

> The CL-Containers system would enjoy having ~ asdf-system-connections
> around. See http://www.cliki.net/asdf-system-connections for details
> and download instructions.

* gnu/packages/lisp-xyz.scm (sbcl-cl-containers)[inputs]: Remove
  labels. Add sbcl-asdf-system-connections, as suggested in worming.
  [file-name]: Use string for the name field.
---
 gnu/packages/lisp-xyz.scm | 6 +++---
 1 file changed, 3 insertions(+), 3 deletions(-)

diff --git a/gnu/packages/lisp-xyz.scm b/gnu/packages/lisp-xyz.scm
index 345932dff9..58c97b5d68 100644
--- a/gnu/packages/lisp-xyz.scm
+++ b/gnu/packages/lisp-xyz.scm
@@ -7594,7 +7594,7 @@ (define-public ecl-metatilities-base
 
 (define-public sbcl-cl-containers
   (let ((commit "3d1df53c22403121bffb5d553cf7acb1503850e7")
-        (revision "3"))
+        (revision "4"))
     (package
       (name "sbcl-cl-containers")
       (version (git-version "0.12.1" revision commit))
@@ -7604,7 +7604,7 @@ (define-public sbcl-cl-containers
          (uri (git-reference
                (url "https://github.com/gwkkwg/cl-containers")
                (commit commit)))
-         (file-name (git-file-name name version))
+         (file-name (git-file-name "cl-containers" version))
          (sha256
           (base32
            "18s6jfq11n8nv9k4biz32pm1s7y9zl054ry1gmdbcf39nisy377y"))))
@@ -7612,7 +7612,7 @@ (define-public sbcl-cl-containers
       (native-inputs
        (list sbcl-lift))
       (inputs
-       `(("metatilities-base" ,sbcl-metatilities-base)))
+       (list sbcl-metatilities-base sbcl-asdf-system-connections))
       (arguments
        '(#:phases
          (modify-phases %standard-phases
-- 
2.38.0

[bug#59344] [PATCH 2/2] gnu: Add cl-graph

[Sharlatan Hellseher]

* gnu/packages/lisp-xyz.scm (cl-graph, sbcl-cl-graph): New variables.
---
 gnu/packages/lisp-xyz.scm | 45 +++++++++++++++++++++++++++++++++++++++
 1 file changed, 45 insertions(+)

diff --git a/gnu/packages/lisp-xyz.scm b/gnu/packages/lisp-xyz.scm
index 58c97b5d68..fa0a1dfcaa 100644
--- a/gnu/packages/lisp-xyz.scm
+++ b/gnu/packages/lisp-xyz.scm
@@ -1976,6 +1976,51 @@ (define-public cl-hu.dwim.graphviz
 (define-public ecl-hu.dwim.graphviz
   (sbcl-package->ecl-package sbcl-hu.dwim.graphviz))
 
+(define-public sbcl-cl-graph
+  (let ((commit "3cb786797b24883d784b7350e7372e8b1e743508")
+        (revision "1"))
+    (package
+      (name "sbcl-cl-graph")
+      (version (git-version "0.10.2" revision commit))
+      (source
+       (origin
+         (method git-fetch)
+         (uri (git-reference
+               (url "https://github.com/gwkkwg/cl-graph")
+               (commit commit)))
+         (file-name (git-file-name "cl-graph" version))
+         (sha256
+          (base32 "1748rj52f2jmd5jvsy9jwhn0zf73sjzjhwhnljvq6yi2kdqr30kl"))))
+      (build-system asdf-build-system/sbcl)
+      (arguments
+       ;; TODO: (Sharlatan-20221118T215839+0000): Tests failed
+       ;;
+       ;; https://github.com/gwkkwg/cl-graph/issues/17
+       ;;
+       `(#:tests? #f
+         #:asd-systems '("cl-graph" "cl-graph+hu.dwim.graphviz")))
+      (native-inputs
+       (list sbcl-lift sbcl-moptilities))
+      (inputs
+       (list sbcl-hu.dwim.graphviz
+             sbcl-cl-mathstats
+             sbcl-dynamic-classes
+             sbcl-metabang-bind
+             sbcl-metacopy
+             sbcl-metatilities-base))
+      (home-page "https://github.com/gwkkwg/cl-graph")
+      (synopsis "Common Lisp library for manipulating graphs and running graph algorithms")
+      (description
+       "This package provides a Graph manipulation utilities for Common Lisp.")
+      (license license:expat))))
+
+;; NOTE: (Sharlatan-20221118T214734+0000): No ECL supoort
+;;
+;; ecl-cl-graph
+
+(define-public cl-cl-graph
+  (sbcl-package->cl-source-package sbcl-cl-graph))
+
 (define-public sbcl-babel
   ;; No release since 2014.
   (let ((commit "f892d0587c7f3a1e6c0899425921b48008c29ee3")
-- 
2.38.0

bug#59344: [PATCH 2/2] gnu: Add cl-graph

[Guillaume Le Vaillant]

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Patches pushed as c9524eca895a85d8acbb4c75faa17c397faaffdd and
a02cd9623f1468205d7dee5f7545f4ed76007b4d.
Thanks.

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