From: "Ludovic Courtès" <ludo@gnu.org>
To: 72877@debbugs.gnu.org
Cc: "Ludovic Courtès" <ludovic.courtes@inria.fr>,
"Andreas Enge" <andreas@enge.fr>,
"Eric Bavier" <bavier@posteo.net>,
"Sharlatan Hellseher" <sharlatanus@gmail.com>
Subject: [bug#72877] [PATCH 1/8] gnu: petsc: Update to 3.21.4.
Date: Thu, 29 Aug 2024 17:39:34 +0200 [thread overview]
Message-ID: <7c1e3b92955a4133ffae9bc277f0b8a2d89df6d4.1724945557.git.ludo@gnu.org> (raw)
In-Reply-To: <cover.1724945557.git.ludo@gnu.org>
From: Ludovic Courtès <ludovic.courtes@inria.fr>
* gnu/packages/maths.scm (petsc): Update to 3.21.4. Update source URL.
[arguments]: Move ‘check’ phase after ‘install’.
[home-page]: Update.
Change-Id: I8e7244ad4f8566119bc259f1dccec9589760a491
---
gnu/packages/maths.scm | 18 ++++++++++++++----
1 file changed, 14 insertions(+), 4 deletions(-)
diff --git a/gnu/packages/maths.scm b/gnu/packages/maths.scm
index 557d9acc48..4be9ad9d7e 100644
--- a/gnu/packages/maths.scm
+++ b/gnu/packages/maths.scm
@@ -3510,15 +3510,15 @@ (define-public maxflow
(define-public petsc
(package
(name "petsc")
- (version "3.16.1")
+ (version "3.21.4")
(source
(origin
(method url-fetch)
;; The *-lite-* tarball does not contain the *large* documentation
- (uri (string-append "http://ftp.mcs.anl.gov/pub/petsc/release-snapshots/"
+ (uri (string-append "https://web.cels.anl.gov/projects/petsc/download/release-snapshots/"
"petsc-lite-" version ".tar.gz"))
(sha256
- (base32 "0sm03vpg010q9icidiq587n325m0598cj6hab2rdv85nwyygg74h"))))
+ (base32 "1394ybnchawb2kghx4xk36gw26930aa73lxyw96diiqp8rnhgbm9"))))
(outputs '("out" ; libraries and headers
"examples")) ; ~30MiB of examples
(build-system gnu-build-system)
@@ -3614,6 +3614,16 @@ (define-public petsc
(("([[:graph:]]+)/bin/diff") "diff")
(("([[:graph:]]+)/bin/sed") "sed")
(("([[:graph:]]+)/bin/gfortran") "gfortran")))))
+
+ ;; Some of the tests get linked with '-L$prefix/lib -lpetsc' (even
+ ;; though that's unnecessary because they also explicitly link
+ ;; against 'libpetsc.so' from the build directory). To work around
+ ;; it, run tests after installation. See
+ ;; <https://gitlab.com/petsc/petsc/-/issues/1634>.
+ (delete 'check)
+ (add-after 'install 'check
+ (assoc-ref %standard-phases 'check))
+
(add-after 'install 'move-examples
(lambda* (#:key outputs #:allow-other-keys)
(let* ((out (assoc-ref outputs "out"))
@@ -3622,7 +3632,7 @@ (define-public petsc
(exdir' (string-append examples "/share/petsc/examples")))
(copy-recursively exdir exdir')
(delete-file-recursively exdir)))))))
- (home-page "https://www.mcs.anl.gov/petsc")
+ (home-page "https://petsc.org")
(synopsis "Library to solve PDEs")
(description "PETSc, pronounced PET-see (the S is silent), is a suite of
data structures and routines for the scalable (parallel) solution of
--
2.45.2
next prev parent reply other threads:[~2024-08-29 15:40 UTC|newest]
Thread overview: 12+ messages / expand[flat|nested] mbox.gz Atom feed top
2024-08-29 15:38 [bug#72877] [PATCH 0/8] Upgrade PETSc, SLEPc, SUNDIALS, and DealII Ludovic Courtès
2024-08-29 15:39 ` Ludovic Courtès [this message]
2024-08-29 15:39 ` [bug#72877] [PATCH 2/8] gnu: python-petsc4py: Update to 3.21.4 Ludovic Courtès
2024-08-29 15:39 ` [bug#72877] [PATCH 3/8] gnu: slepc: Update to 3.21.1 Ludovic Courtès
2024-08-29 15:39 ` [bug#72877] [PATCH 4/8] gnu: python-slepc4py: " Ludovic Courtès
2024-08-29 15:39 ` [bug#72877] [PATCH 5/8] gnu: petsc: Make ‘petscvariables’ reproducible Ludovic Courtès
2024-08-29 15:39 ` [bug#72877] [PATCH 6/8] gnu: sundials: Upgrade to 7.1.1 Ludovic Courtès
2024-08-29 15:39 ` [bug#72877] [PATCH 7/8] gnu: sundials, sundials-openmpi: Use gexps Ludovic Courtès
2024-08-29 15:39 ` [bug#72877] [PATCH 8/8] gnu: dealii: Update to 9.6.0 Ludovic Courtès
2024-09-05 8:17 ` bug#72877: [PATCH 0/8] Upgrade PETSc, SLEPc, SUNDIALS, and DealII Ludovic Courtès
2024-09-05 13:07 ` [bug#72877] " Eric Bavier
2024-09-05 14:40 ` Ludovic Courtès
Reply instructions:
You may reply publicly to this message via plain-text email
using any one of the following methods:
* Save the following mbox file, import it into your mail client,
and reply-to-all from there: mbox
Avoid top-posting and favor interleaved quoting:
https://en.wikipedia.org/wiki/Posting_style#Interleaved_style
List information: https://guix.gnu.org/
* Reply using the --to, --cc, and --in-reply-to
switches of git-send-email(1):
git send-email \
--in-reply-to=7c1e3b92955a4133ffae9bc277f0b8a2d89df6d4.1724945557.git.ludo@gnu.org \
--to=ludo@gnu.org \
--cc=72877@debbugs.gnu.org \
--cc=andreas@enge.fr \
--cc=bavier@posteo.net \
--cc=ludovic.courtes@inria.fr \
--cc=sharlatanus@gmail.com \
/path/to/YOUR_REPLY
https://kernel.org/pub/software/scm/git/docs/git-send-email.html
* If your mail client supports setting the In-Reply-To header
via mailto: links, try the mailto: link
Be sure your reply has a Subject: header at the top and a blank line
before the message body.
Code repositories for project(s) associated with this public inbox
https://git.savannah.gnu.org/cgit/guix.git
This is a public inbox, see mirroring instructions
for how to clone and mirror all data and code used for this inbox;
as well as URLs for read-only IMAP folder(s) and NNTP newsgroup(s).