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dkim=fail ("headers rsa verify failed") header.d=mdc-berlin.de header.s=mdc header.b=l86fuJ0q; dmarc=fail reason="SPF not aligned (relaxed)" header.from=mdc-berlin.de (policy=none); spf=pass (aspmx1.migadu.com: domain of "guix-patches-bounces+larch=yhetil.org@gnu.org" designates 209.51.188.17 as permitted sender) smtp.mailfrom="guix-patches-bounces+larch=yhetil.org@gnu.org" X-Spam: Yes X-Migadu-Spam-Score: 8.19 X-Spam-Score: 8.19 X-Migadu-Queue-Id: 0A99D404FC X-TUID: mw60CmlpZvKR * gnu/packages/bioinformatics.scm (python-goatools): New variable. --- gnu/packages/bioinformatics.scm | 31 +++++++++++++++++++++++++++++++ 1 file changed, 31 insertions(+) diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm index 7db8a91e80..db76d04594 100644 --- a/gnu/packages/bioinformatics.scm +++ b/gnu/packages/bioinformatics.scm @@ -12337,6 +12337,37 @@ (define-public python-genomic-regions using the same syntax.") (license license:expat))) +(define-public python-goatools + (package + (name "python-goatools") + (version "1.3.1") + (source (origin + (method url-fetch) + (uri (pypi-uri "goatools" version)) + (sha256 + (base32 + "1p53h7bnbmi23lcgsajf9vb8vxgjp6lmbz0hl1cx62230jvbfp62")))) + (build-system pyproject-build-system) + (arguments + (list #:tests? #f)) + (propagated-inputs (list python-docopt + python-numpy + python-openpyxl + python-pandas + python-pydot + python-requests + python-scipy + python-statsmodels + python-xlsxwriter)) + (home-page "https://github.com/tanghaibao/goatools") + (synopsis "Python scripts to find enrichment of GO terms") + (description "Python scripts to find enrichment of GO terms. +In addition, this package is used for processing the +obo-formatted file from Gene Ontology website. The +data structure is a directed acyclic graph that allows +easy traversal from leaf to root.") + (license license:bsd-3))) + (define-public python-loompy (package (name "python-loompy") base-commit: f0a51a2bda26f9cc1e0b54b48712bd7cc54408e9 -- 2.34.1