From mboxrd@z Thu Jan 1 00:00:00 1970 Return-Path: Received: from mp1 ([2001:41d0:8:6d80::]) (using TLSv1.3 with cipher TLS_AES_256_GCM_SHA384 (256/256 bits)) by ms0.migadu.com with LMTPS id 6AYkLhN2/2DHsQAAgWs5BA (envelope-from ) for ; Tue, 27 Jul 2021 04:57:23 +0200 Received: from aspmx1.migadu.com ([2001:41d0:8:6d80::]) (using TLSv1.3 with cipher TLS_AES_256_GCM_SHA384 (256/256 bits)) by mp1 with LMTPS id iLikKRN2/2CrcgAAbx9fmQ (envelope-from ) for ; Tue, 27 Jul 2021 02:57:23 +0000 Received: from lists.gnu.org (lists.gnu.org [209.51.188.17]) (using TLSv1.2 with cipher ECDHE-RSA-AES256-GCM-SHA384 (256/256 bits)) (No client certificate requested) by aspmx1.migadu.com (Postfix) with ESMTPS id 3A3C52B1B3 for ; Tue, 27 Jul 2021 04:57:21 +0200 (CEST) Received: from localhost ([::1]:34582 helo=lists1p.gnu.org) by lists.gnu.org with esmtp (Exim 4.90_1) (envelope-from ) id 1m8DHU-0004l3-7q for larch@yhetil.org; Mon, 26 Jul 2021 22:57:20 -0400 Received: from eggs.gnu.org ([2001:470:142:3::10]:50788) by lists.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from ) id 1m8DHD-0004ko-73 for guix-patches@gnu.org; Mon, 26 Jul 2021 22:57:03 -0400 Received: from debbugs.gnu.org ([209.51.188.43]:40365) by eggs.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_128_GCM_SHA256:128) (Exim 4.90_1) (envelope-from ) id 1m8DHC-0006By-Dw for guix-patches@gnu.org; Mon, 26 Jul 2021 22:57:02 -0400 Received: from Debian-debbugs by debbugs.gnu.org with local (Exim 4.84_2) (envelope-from ) id 1m8DHC-0008P4-3k for guix-patches@gnu.org; Mon, 26 Jul 2021 22:57:02 -0400 X-Loop: help-debbugs@gnu.org Subject: [bug#49729] [PATCH core-updates 01/20] gnu: python-biom-format: Remove obsolete phase. 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DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/relaxed; d=mgsn.dev; s=key1; t=1627354611; h=from:from:reply-to:subject:subject:date:date:message-id:message-id: to:to:cc:mime-version:mime-version: content-transfer-encoding:content-transfer-encoding: in-reply-to:in-reply-to:references:references; bh=MoFNtwKk5/eQ5NQ/ZeDW0ePghf586hvK1P7ud8XINW0=; b=USyC9in1o4JWW4kg1RX9+rCLLsMdWFCIYSAf6iSW2rwFE+T5D+IdEw8EewBdKaHc4F30Z4 PFq3MiXltSx85hg6xDV1jVP5tSTYrbkItEN9h20oF+SprHFe50oZdQUAgFi35u2xaXrkI+ 68JY3GEKo0ZBfsdLPbtVyK19tWd5Ku0= From: Sarah Morgensen Date: Mon, 26 Jul 2021 19:56:30 -0700 Message-Id: <6c136dc582692dd6fcac4565b8f3d57ee5f6ce72.1627351168.git.iskarian@mgsn.dev> In-Reply-To: References: MIME-Version: 1.0 Content-Transfer-Encoding: 8bit X-Migadu-Auth-User: iskarian@mgsn.dev X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list X-BeenThere: guix-patches@gnu.org List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: guix-patches-bounces+larch=yhetil.org@gnu.org Sender: "Guix-patches" X-Migadu-Flow: FLOW_IN ARC-Message-Signature: i=1; a=rsa-sha256; c=relaxed/relaxed; d=yhetil.org; s=key1; t=1627354641; h=from:from:sender:sender:reply-to:subject:subject:date:date: message-id:message-id:to:to:cc:mime-version:mime-version: content-transfer-encoding:content-transfer-encoding:resent-cc: resent-from:resent-sender:resent-message-id:in-reply-to:in-reply-to: references:references:list-id:list-help:list-unsubscribe: list-subscribe:list-post:dkim-signature; bh=MoFNtwKk5/eQ5NQ/ZeDW0ePghf586hvK1P7ud8XINW0=; b=BvC8d11r+FU3fxlf0FPSi9okqXgaaN9Hlk0wjgKfK8OaOuRYH+ivtzjT/bjtlwSw+o5Xdl uI1g1yzcAAWs/f/dWV1l3ChPWmoVOAC/c6d9Goc6dPeewGg+6k+ThDuBFVLXYndiacWS7D JjlpdZDMWzWMDO7o+oSpr3GR4vylv+1KhFbkYiKXQfzr+7FsTyPUKG4sgxUrnLJfqiYQda XpIYfILLKTvMq3ZCllCObaGttQRDtKvVSvPxtjBgaf5BXQXIzDWqXwZ7KGwJ/NB4MH0STG PuCl0P6TGKXj3AiLW+10P9+bakaKrMQtBc2Z/tipoUJhgaklY4QYfI5aizhCNA== ARC-Seal: i=1; s=key1; d=yhetil.org; t=1627354641; a=rsa-sha256; cv=none; b=lqfWDI4YCigaOvWTKcbW2X1pOxKqyQ/KESrls/S4jkyu5IgFwlJcv7400btDfAe3VBScK1 FlPX/kogH6ypvvQv0SdKBek7TmxIUoEsIogz9IPmDVJILGHziG5QUNTbMMVY71AHugzgIa kz6cO3VZMVDaVI9YME4tzGjag/Nkk8QIbJPt7TOyUcqC+4PMbrRSLYd26HOotkteKJryV2 TRsPMV9SOmT+809V+WbDe1lzYTdCfwMjX5zhS6qT3j86iUuRnirRaikAnxceIvgCz9GK3Q 7q71Li6knvQTb0Q5d31xfD5+5ChK8Ot/ZRRiSWESZe+JZx8zU9UI+/HNZjiawQ== ARC-Authentication-Results: i=1; aspmx1.migadu.com; dkim=fail ("headers rsa verify failed") header.d=mgsn.dev header.s=key1 header.b=USyC9in1; dmarc=fail reason="SPF not aligned (relaxed)" header.from=mgsn.dev (policy=none); spf=pass (aspmx1.migadu.com: domain of guix-patches-bounces@gnu.org designates 209.51.188.17 as permitted sender) smtp.mailfrom=guix-patches-bounces@gnu.org X-Migadu-Spam-Score: 3.68 Authentication-Results: aspmx1.migadu.com; dkim=fail ("headers rsa verify failed") header.d=mgsn.dev header.s=key1 header.b=USyC9in1; dmarc=fail reason="SPF not aligned (relaxed)" header.from=mgsn.dev (policy=none); spf=pass (aspmx1.migadu.com: domain of guix-patches-bounces@gnu.org designates 209.51.188.17 as permitted sender) smtp.mailfrom=guix-patches-bounces@gnu.org X-Migadu-Queue-Id: 3A3C52B1B3 X-Spam-Score: 3.68 X-Migadu-Scanner: scn0.migadu.com X-TUID: poXGi+4UtQ03 * gnu/packages/bioinformatics.scm (python-biom-format)[arguments] <#:phases>: Remove 'make-files-writable phase. --- gnu/packages/bioinformatics.scm | 9 +-------- 1 file changed, 1 insertion(+), 8 deletions(-) diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm index 002b417b54..aa9a1328f0 100644 --- a/gnu/packages/bioinformatics.scm +++ b/gnu/packages/bioinformatics.scm @@ -1012,14 +1012,7 @@ Python.") (("^(.+)def test_from_hdf5_issue_731" m indent) (string-append indent "@npt.dec.skipif(True, msg='Guix')\n" - m))) - #t)) - (add-before 'reset-gzip-timestamps 'make-files-writable - (lambda* (#:key outputs #:allow-other-keys) - (let ((out (assoc-ref outputs "out"))) - (for-each (lambda (file) (chmod file #o644)) - (find-files out "\\.gz")) - #t)))))) + m)))))))) (propagated-inputs `(("python-numpy" ,python-numpy) ("python-scipy" ,python-scipy) -- 2.31.1