From mboxrd@z Thu Jan 1 00:00:00 1970 Return-Path: Received: from mp11.migadu.com ([2001:41d0:306:2d92::]) (using TLSv1.3 with cipher TLS_AES_256_GCM_SHA384 (256/256 bits)) by ms9.migadu.com with LMTPS id +D2sCZuxwWReNgAASxT56A (envelope-from ) for ; Thu, 27 Jul 2023 01:51:55 +0200 Received: from aspmx1.migadu.com ([2001:41d0:306:2d92::]) (using TLSv1.3 with cipher TLS_AES_256_GCM_SHA384 (256/256 bits)) by mp11.migadu.com with LMTPS id mM/ACZuxwWRZ0wAA9RJhRA (envelope-from ) for ; Thu, 27 Jul 2023 01:51:55 +0200 Received: from lists.gnu.org (lists.gnu.org [209.51.188.17]) (using TLSv1.2 with cipher ECDHE-RSA-AES256-GCM-SHA384 (256/256 bits)) (No client certificate requested) by aspmx1.migadu.com (Postfix) with ESMTPS id D26CA51491 for ; Thu, 27 Jul 2023 01:51:54 +0200 (CEST) Authentication-Results: aspmx1.migadu.com; dkim=fail ("headers rsa verify failed") header.d=gmail.com header.s=20221208 header.b=OSFMJ0My; spf=pass (aspmx1.migadu.com: domain of "guix-patches-bounces+larch=yhetil.org@gnu.org" designates 209.51.188.17 as permitted sender) smtp.mailfrom="guix-patches-bounces+larch=yhetil.org@gnu.org"; dmarc=fail reason="SPF not aligned (relaxed)" header.from=gmail.com (policy=none) ARC-Message-Signature: i=1; a=rsa-sha256; c=relaxed/relaxed; d=yhetil.org; s=key1; t=1690415514; h=from:from:sender:sender:reply-to:subject:subject:date:date: message-id:message-id:to:to:cc:cc:mime-version:mime-version: content-transfer-encoding:content-transfer-encoding:resent-cc: resent-from:resent-sender:resent-message-id:in-reply-to:in-reply-to: references:references:list-id:list-help:list-unsubscribe: list-subscribe:list-post:dkim-signature; bh=STJ0vATR0crFvyEXsWpMhvgO8CprGSGnTMak8eM8Ch0=; b=anFAnJsNEtZ53y5ivbkWn/IImzKGs7cKCsbMD4S+V/nkAMCxF3awPFN8Kh06Vn78NbCLlk UFn6Sk2sDp5V4D7V+wHO491l3PNDLle7psc11WtlASsqD5f8opf61JHUm8jfIN4sC6a7Uy KievPt5cp6lUz+uqdP22sjbtaaLxyrFCcB9uUrT9NONkVATf/hp78nNIemk0Fyvly0Cdih g0PgHqz0x4wy4hZgix3Chijrx6DdUAR5vdKzTAOJmlPN2c0B+BuEIu4DZN6v4JSjXCU69V jnIyoc2beANAs72h/TGBDEfrNdl1w4WXpo3BG9m2dxi45Tnu5c3z/i/uOw08fQ== ARC-Seal: i=1; s=key1; d=yhetil.org; t=1690415514; a=rsa-sha256; cv=none; b=QLc7SmFMmMdDca7DWQCy2ZFGKMh/7fy7JLBeyW6NmELIuxvJoCIhVEGNI/lyJZRxbrJ8L3 /MteKAt+f3E/Q8KhnYbSeRMJ2yexpQA4P4DaeKcl2reDizpC1scqb48RY6fE8VRwhANCl/ WfFMLgAumLdbjK9yv5dzrOihgYh1aPD8W1J0OhALKuVUk+fbBZywXHNNBlc1RfkzkJecZI 9lTFVR6rRIL40gQ0if9LZb20yqlVyN3X8UwzxeP5yWgCgbY92Zey33Q3/w7gfUz1LiEXVZ u09lieFWy11SWqmIz8Tpq836TP19tO496e7PZrTtzOtzdL8wducqvicp9zIkXA== ARC-Authentication-Results: i=1; aspmx1.migadu.com; dkim=fail ("headers rsa verify failed") header.d=gmail.com header.s=20221208 header.b=OSFMJ0My; spf=pass (aspmx1.migadu.com: domain of "guix-patches-bounces+larch=yhetil.org@gnu.org" designates 209.51.188.17 as permitted sender) smtp.mailfrom="guix-patches-bounces+larch=yhetil.org@gnu.org"; dmarc=fail reason="SPF not aligned (relaxed)" header.from=gmail.com (policy=none) Received: from localhost ([::1] helo=lists1p.gnu.org) by lists.gnu.org with esmtp (Exim 4.90_1) (envelope-from ) id 1qOnjp-0002co-2B; Wed, 26 Jul 2023 19:16:13 -0400 Received: from eggs.gnu.org ([2001:470:142:3::10]) by lists.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from ) id 1qOnjj-0002ZP-KK for guix-patches@gnu.org; Wed, 26 Jul 2023 19:16:08 -0400 Received: from debbugs.gnu.org ([2001:470:142:5::43]) by eggs.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_128_GCM_SHA256:128) (Exim 4.90_1) (envelope-from ) id 1qOnji-00014Z-Vl for guix-patches@gnu.org; Wed, 26 Jul 2023 19:16:07 -0400 Received: from Debian-debbugs by debbugs.gnu.org with local (Exim 4.84_2) (envelope-from ) id 1qOnjg-0003wr-7K; Wed, 26 Jul 2023 19:16:04 -0400 X-Loop: help-debbugs@gnu.org Subject: [bug#64201] [PATCH v2 01/22] gnu: sextractor: Update to 2.28.0, fix build. Resent-From: Sharlatan Hellseher Original-Sender: "Debbugs-submit" Resent-CC: andreas@enge.fr, efraim@flashner.co.il, bavier@posteo.net, guix-patches@gnu.org Resent-Date: Wed, 26 Jul 2023 23:16:04 +0000 Resent-Message-ID: Resent-Sender: help-debbugs@gnu.org X-GNU-PR-Message: followup 64201 X-GNU-PR-Package: guix-patches X-GNU-PR-Keywords: patch To: 64201@debbugs.gnu.org Cc: Sharlatan Hellseher , Andreas Enge , Efraim Flashner , Eric Bavier X-Debbugs-Original-Xcc: Andreas Enge , Efraim Flashner , Eric Bavier Received: via spool by 64201-submit@debbugs.gnu.org id=B64201.169041336115101 (code B ref 64201); Wed, 26 Jul 2023 23:16:04 +0000 Received: (at 64201) by debbugs.gnu.org; 26 Jul 2023 23:16:01 +0000 Received: from localhost ([127.0.0.1]:40168 helo=debbugs.gnu.org) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1qOnjc-0003vI-3D for submit@debbugs.gnu.org; Wed, 26 Jul 2023 19:16:01 -0400 Received: from mail-wm1-x330.google.com ([2a00:1450:4864:20::330]:47279) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1qOnjZ-0003uj-9L for 64201@debbugs.gnu.org; Wed, 26 Jul 2023 19:15:57 -0400 Received: by mail-wm1-x330.google.com with SMTP id 5b1f17b1804b1-3fbc5d5742bso3267965e9.2 for <64201@debbugs.gnu.org>; Wed, 26 Jul 2023 16:15:57 -0700 (PDT) DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/relaxed; d=gmail.com; s=20221208; t=1690413351; x=1691018151; h=content-transfer-encoding:mime-version:references:in-reply-to :message-id:date:subject:cc:to:from:from:to:cc:subject:date :message-id:reply-to; bh=STJ0vATR0crFvyEXsWpMhvgO8CprGSGnTMak8eM8Ch0=; b=OSFMJ0MyJ98cSrCsoqT+NiuqQHyijBhOIspLu4Oay58UCO2gRwe2TmF4pdlhUR38QA toWt57Q4oH3yebdERvrkHWFjxCm6L1HLV/dUqF0OM87HEBRj77yDUSDeJ7B7xkkqDYcJ RGZHp/xyB9NgrM9ZBIIw1zlajw8Xz8A7SXSXh/a4joZG233N9hCFmkKFgaH1FY9gweg5 EllZfaUZH4Zp9KIzd5JEYJxosW8q6fyXPBuvk7Rd7gBOuXCU6nFQf6o1U4aYfC/5DAob hYAprU6/Er60ATrZeoaS5Oe9h43nlqEDtTJpgRJ+tuPPTl0OYwWV/bM6pM4yNJ0UW4Nc HiPw== X-Google-DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/relaxed; d=1e100.net; s=20221208; t=1690413351; x=1691018151; h=content-transfer-encoding:mime-version:references:in-reply-to :message-id:date:subject:cc:to:from:x-gm-message-state:from:to:cc :subject:date:message-id:reply-to; bh=STJ0vATR0crFvyEXsWpMhvgO8CprGSGnTMak8eM8Ch0=; b=XomMdW/8Cxp6u0IvCPZeZ3iFaXM4crYSJBleSIVb2D/FJXe4CSF9guQatmIcWO+GSF M45K2crsIsBZ8e8l0ww2FnciV9oWmuhb4Hj3hdTlOT0Ik5TJ8w4w1pbhLpFkLUxrsfa2 fHmAGymZUAS9Jf3Ry44i8ATtUwztbYhJOtbBT9IbKYqmd4pglfDeBzIbZoh+iuAUYfbv xTQueh9tMd+pRjUJJbW9r0s4QqmEKpgBlOL6rYe+VPSoZpLUMwMm8kNFOlZa6IPT3AA9 2Nkn310UwPfDiHwDeLEMhMCCOSjebTzLSb3LcR2mirp3Rz9OmX5bNZ1TDNMPsB84VcJh e/+w== X-Gm-Message-State: ABy/qLaunnS15ZQG732jN0CoKPy3AzZVd+ADRDwdG+zAfK5egUigyXbe 4gj22vyFOE2MeJ3FN3QFKMSRZ4N9+Hs8XQ== X-Google-Smtp-Source: APBJJlFsTp0wIquCNtIk6vL/tYLxoucQxxZYhaSlMLl1YanwPZR+4dcbxIdTpXJwy+zC8KbGimxFKg== X-Received: by 2002:a05:600c:3789:b0:3fb:fa61:a4ea with SMTP id o9-20020a05600c378900b003fbfa61a4eamr343915wmr.11.1690413351522; Wed, 26 Jul 2023 16:15:51 -0700 (PDT) Received: from guxtil.incerto.xyz (cpc100856-bagu15-2-0-cust368.1-3.cable.virginm.net. [82.25.93.113]) by smtp.gmail.com with ESMTPSA id u20-20020a05600c00d400b003faef96ee78sm3147472wmm.33.2023.07.26.16.15.51 (version=TLS1_3 cipher=TLS_AES_256_GCM_SHA384 bits=256/256); Wed, 26 Jul 2023 16:15:51 -0700 (PDT) From: Sharlatan Hellseher Date: Thu, 27 Jul 2023 00:15:27 +0100 Message-Id: <6187c62880750bb363190e92b8c5fb5c7d3198e5.1690410490.git.sharlatanus@gmail.com> X-Mailer: git-send-email 2.40.1 In-Reply-To: References: MIME-Version: 1.0 Content-Transfer-Encoding: 8bit X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list X-BeenThere: guix-patches@gnu.org List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: guix-patches-bounces+larch=yhetil.org@gnu.org Sender: guix-patches-bounces+larch=yhetil.org@gnu.org X-Migadu-Flow: FLOW_IN X-Migadu-Country: US X-Spam: Yes X-Migadu-Scanner: mx2.migadu.com X-Migadu-Spam-Score: 12.86 X-Spam-Score: 12.86 X-Migadu-Queue-Id: D26CA51491 X-Migadu-Spam: Yes X-TUID: MklM/+VtGEaL * gnu/packages/astronomy.scm (sextractor): Update to 2.28.0, fix build. [arguments]: Add configure flags for CFitsio detection. [inputs]: Add cfitsio. --- gnu/packages/astronomy.scm | 11 ++++++++--- 1 file changed, 8 insertions(+), 3 deletions(-) diff --git a/gnu/packages/astronomy.scm b/gnu/packages/astronomy.scm index 9351c691d2..4e03e2fcd6 100644 --- a/gnu/packages/astronomy.scm +++ b/gnu/packages/astronomy.scm @@ -832,7 +832,7 @@ (define-public phd2 (define-public sextractor (package (name "sextractor") - (version "2.25.0") + (version "2.28.0") (source (origin (method git-fetch) @@ -841,7 +841,7 @@ (define-public sextractor (commit version))) (file-name (git-file-name name version)) (sha256 - (base32 "0q69n3nyal57h3ik2xirwzrxzljrwy9ivwraxzv9566vi3n4z5mw")))) + (base32 "15v7brjiraj2rdyxiidcgb58b3dqzdd363j31cjrfqhd1wc8ii5j")))) (build-system gnu-build-system) ;; NOTE: (Sharlatan-20210124T103117+0000): Building with `atlas' is failing ;; due to missing shared library which required on configure phase. Switch @@ -851,6 +851,10 @@ (define-public sextractor `(#:configure-flags (list "--enable-openblas" + (string-append + "--with-cfitsio-libdir=" (assoc-ref %build-inputs "cfitsio") "/lib") + (string-append + "--with-cfitsio-incdir=" (assoc-ref %build-inputs "cfitsio") "/include") (string-append "--with-openblas-libdir=" (assoc-ref %build-inputs "openblas") "/lib") (string-append @@ -862,7 +866,8 @@ (define-public sextractor (native-inputs (list autoconf automake libtool)) (inputs - `(("openblas" ,openblas) + `(("cfitsio" ,cfitsio) + ("openblas" ,openblas) ("fftw" ,fftwf))) (home-page "https://www.astromatic.net/software/sextractor") (synopsis "Extract catalogs of sources from astronomical images") -- 2.40.1