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From: Navid Afkhami <navid.afkhami@mdc-berlin.de>
To: 66118@debbugs.gnu.org
Cc: Navid Afkhami <navid.afkhami@mdc-berlin.de>
Subject: [bug#66118] [PATCH] gnu: Add r-omixerrpm.
Date: Wed, 20 Sep 2023 10:39:12 +0000	[thread overview]
Message-ID: <5b11081be482875b9b4a1da4c892c8f6c5f07006.1695206352.git.navid.afkhami@mdc-berlin.de> (raw)

* gnu/packages/bioinformatics.scm (r-omixerrpm): New variable.
---
 gnu/packages/bioinformatics.scm | 23 +++++++++++++++++++++++
 1 file changed, 23 insertions(+)

diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index 6acf37b312..d4da92b6b6 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -15065,6 +15065,29 @@ (define-public r-dyngen
 dynamic cellular processes at single-cell resolution.")
     (license license:expat)))
 
+(define-public r-omixerrpm
+  (let ((commit "184f1cc99aefed722e20eb00eda082348a064c4e")
+        (revision "1"))
+    (package
+      (name "r-omixerrpm")
+      (version (git-version "0.3.3" revision commit))
+      (source (origin
+                (method git-fetch)
+                (uri (git-reference
+                      (url "https://github.com/omixer/omixer-rpmR")
+                      (commit commit)))
+                (file-name (git-file-name name version))
+                (sha256
+                 (base32
+                  "10ipasg8zi4ln13a5zj2l4a35hd3sfy3p6gir0sw0vf3cbc11lnz"))))
+      (properties `((upstream-name . "omixerRpm")))
+      (build-system r-build-system)
+      (home-page "https://github.com/omixer/omixer-rpmR")
+      (synopsis "Metabolic module profiling of microbiome samples")
+      (description
+       "An R interface for microbiome metabolic module profiling with omixer-rpm.")
+      (license license:gpl3))))
+
 ;; Needed for r-liana
 (define-public r-omnipathr/devel
   (let ((commit "679bb79e319af246a16968d27d64d8d6937a331a")

base-commit: 6bd17a0806ad32d1493ac51a7443276f719c4224
-- 
2.34.1





             reply	other threads:[~2023-09-20 10:41 UTC|newest]

Thread overview: 2+ messages / expand[flat|nested]  mbox.gz  Atom feed  top
2023-09-20 10:39 Navid Afkhami [this message]
2023-09-20 12:31 ` bug#66118: Can not be added to Guix - The package contains a non-free binary Navid.Afkhami

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