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;;; GNU Guix --- Functional package management for GNU
;;; Copyright © 2019 Ricardo Wurmus <rekado@elephly.net>
;;; Copyright © 2019 Tobias Geerinckx-Rice <me@tobias.gr>
;;; Copyright © 2019, 2020 Efraim Flashner <efraim@flashner.co.il>
;;; Copyright © 2019 Maxim Cournoyer <maxim.cournoyer@gmail.com>
;;; Copyright © 2019 Hartmut Goebel <h.goebel@crazy-compilers.com>
;;; Copyright © 2020 Julien Lepiller <julien@lepiller.eu>
;;; Copyright © 2020 Marius Bakke <mbakke@fastmail.com>
;;; Copyright © 2020 Edouard Klein <edk@beaver-labs.com>
;;; Copyright © 2020 Tanguy Le Carrour <tanguy@bionelang.org>
;;;
;;; This file is part of GNU Guix.
;;;
;;; GNU Guix is free software; you can redistribute it and/or modify it
;;; under the terms of the GNU General Public License as published by
;;; the Free Software Foundation; either version 3 of the License, or (at
;;; your option) any later version.
;;;
;;; GNU Guix is distributed in the hope that it will be useful, but
;;; WITHOUT ANY WARRANTY; without even the implied warranty of
;;; MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
;;; GNU General Public License for more details.
;;;
;;; You should have received a copy of the GNU General Public License
;;; along with GNU Guix.  If not, see <http://www.gnu.org/licenses/>.

(define-module (gnu packages python-check)
  #:use-module (gnu packages)
  #:use-module (gnu packages check)
  #:use-module (gnu packages python-web)
  #:use-module (gnu packages python-xyz)
  #:use-module (gnu packages web)
  #:use-module (gnu packages xml)
  #:use-module (guix utils)
  #:use-module ((guix licenses) #:prefix license:)
  #:use-module (guix packages)
  #:use-module (guix git-download)
  #:use-module (guix download)
  #:use-module (guix build-system python))

(define-public python-coveralls
  (package
    (name "python-coveralls")
    (version "1.11.1")
    (home-page "https://github.com/coveralls-clients/coveralls-python")
    (source
     (origin
       ;; The PyPI release lacks tests, so we pull from git instead.
       (method git-fetch)
       (uri (git-reference (url home-page) (commit version)))
       (file-name (git-file-name name version))
       (sha256
        (base32
         "1zr1lqdjcfwj6wcx2449mzzjq8bbhwnqcm5vdif5s8hlz35bjxkp"))))
    (build-system python-build-system)
    (arguments
     '(#:phases (modify-phases %standard-phases
                  (add-before 'check 'disable-git-test
                    (lambda _
                      ;; Remove test that requires 'git' and the full checkout.
                      (delete-file "tests/git_test.py")
                      #t))
                  (replace 'check
                    (lambda* (#:key tests? #:allow-other-keys)
                      (if tests?
                          (invoke "pytest" "-vv")
                          (format #t "test suite not run~%"))
                      #t)))))
    (propagated-inputs
     `(("python-coverage" ,python-coverage)
       ("python-docopt" ,python-docopt)
       ("python-pyyaml" ,python-pyyaml)
       ("python-requests" ,python-requests)))
    (native-inputs
     `(("python-mock" ,python-mock)
       ("python-pytest" ,python-pytest)))
    (synopsis "Show coverage stats online via coveralls.io")
    (description
     "Coveralls.io is a service for publishing code coverage statistics online.
This package provides seamless integration with coverage.py (and thus pytest,
nosetests, etc...) in Python projects.")
    (license license:expat)))

(define-public python-vcrpy
  (package
    (name "python-vcrpy")
    (version "2.0.1")
    (source
      (origin
        (method url-fetch)
        (uri (pypi-uri "vcrpy" version))
        (sha256
         (base32
          "0kws7l3hci1dvjv01nxw3805q9v2mwldw58bgl8s90wqism69gjp"))))
    (build-system python-build-system)
    (arguments `(#:tests? #f)) ; tests require more packages for python-pytest-httpbin
    (propagated-inputs
     `(("python-pyyaml" ,python-pyyaml)
       ("python-six" ,python-six)
       ("python-wrapt" ,python-wrapt)
       ("python-yarl" ,python-yarl)))
    (native-inputs
     `(("python-mock" ,python-mock)
       ("python-pytest" ,python-pytest)
       ("python-pytest-httpbin" ,python-pytest-httpbin)))
    (home-page "https://github.com/kevin1024/vcrpy")
    (synopsis "Automatically mock your HTTP interactions")
    (description
     "VCR.py simplifies and speeds up tests that make HTTP requests.  The first
time you run code that is inside a VCR.py context manager or decorated function,
VCR.py records all HTTP interactions that take place through the libraries it
supports and serializes and writes them to a flat file (in yaml format by
default).  This flat file is called a cassette.  When the relevant piece of code
is executed again, VCR.py will read the serialized requests and responses from
the aforementioned cassette file, and intercept any HTTP requests that it
recognizes from the original test run and return the responses that corresponded
to those requests.  This means that the requests will not actually result in
HTTP traffic, which confers several benefits including:
@enumerate
@item The ability to work offline
@item Completely deterministic tests
@item Increased test execution speed
@end enumerate
If the server you are testing against ever changes its API, all you need to do
is delete your existing cassette files, and run your tests again.  VCR.py will
detect the absence of a cassette file and once again record all HTTP
interactions, which will update them to correspond to the new API.")
    (license license:expat)))

(define-public python-pytest-vcr
  ;; This commit fixes integration with pytest-5
  (let ((commit "4d6c7b3e379a6a7cba0b8f9d20b704dc976e9f05")
        (revision "1"))
    (package
      (name "python-pytest-vcr")
      (version (git-version "1.0.2" revision commit))
      (source
        (origin
          (method git-fetch)
          (uri (git-reference
                 (url "https://github.com/ktosiek/pytest-vcr")
                 (commit commit)))
          (file-name (git-file-name name version))
          (sha256
           (base32
            "1yk988zi0la6zpcm3fff0mxf942di2jiymrfqas19nyngj5ygaqs"))))
      (build-system python-build-system)
      (arguments
       `(#:phases
         (modify-phases %standard-phases
           (replace 'check
             (lambda* (#:key inputs outputs #:allow-other-keys)
               (add-installed-pythonpath inputs outputs)
               (invoke "pytest" "tests/"))))))
      (propagated-inputs
       `(("python-pytest" ,python-pytest)
         ("python-vcrpy" ,python-vcrpy)))
      (home-page "https://github.com/ktosiek/pytest-vcr")
      (synopsis "Plugin for managing VCR.py cassettes")
      (description
       "Plugin for managing VCR.py cassettes.")
      (license license:expat))))

(define-public python-pytest-checkdocs
  (package
    (name "python-pytest-checkdocs")
    (version "1.2.2")
    (source
     (origin
       (method url-fetch)
       (uri (pypi-uri "pytest-checkdocs" version))
       (sha256
        (base32 "0j6j1gvj6x451y3qsx4xbaq9p1w9gg3mwk7n0w80cy8vdyjkngb0"))))
    (build-system python-build-system)
    (propagated-inputs
     `(("python-docutils" ,python-docutils)
       ("python-importlib-metadata" ,python-importlib-metadata)
       ("python-more-itertools" ,python-more-itertools)))
    (native-inputs
     `(("python-setuptools-scm" ,python-setuptools-scm)))
    (home-page "https://github.com/jaraco/pytest-checkdocs")
    (synopsis "Check the README when running tests")
    (description
     "This package provides a pytest plugin that checks the long description
of the project to ensure it renders properly.")
    (license license:expat)))

(define-public python-pytest-flake8
  (package
    (name "python-pytest-flake8")
    (version "1.0.6")
    (source
     (origin
       (method url-fetch)
       (uri (pypi-uri "pytest-flake8" version))
       (sha256
        (base32
         "09vhn7r77s1yiqnlwfvh5585f904zpyd6620a90dpccfr1cbp0hv"))))
    (build-system python-build-system)
    (propagated-inputs
     `(("python-flake8" ,python-flake8)))
    (native-inputs
     `(("python-pytest" ,python-pytest)))
    (home-page "https://github.com/tholo/pytest-flake8")
    (synopsis "Pytest plugin to check FLAKE8 requirements")
    (description
     "This package provides a pytest plugin for efficiently checking PEP8
compliance.")
    (license license:bsd-3)))

(define-public python-pytest-isort
  (package
    (name "python-pytest-isort")
    (version "0.3.1")
    (source
     (origin
       (method url-fetch)
       (uri (pypi-uri "pytest-isort" version))
       (sha256
        (base32 "06myn5hhxs5yp8dqr1yjsgcnnxnsrvsqannm00bvaw0qml6ydzjb"))))
    (build-system python-build-system)
    (arguments
     `(#:phases
       (modify-phases %standard-phases
         (replace 'check
           (lambda _
             (setenv "PYTHONPATH"
                     (string-append (getcwd) ":"
                                    (getenv "PYTHONPATH")))
             (invoke "pytest"))))))
    (propagated-inputs
     `(("python-isort" ,python-isort)
       ("python-pytest" ,python-pytest)))
    (home-page "https://github.com/moccu/pytest-isort/")
    (synopsis "Pytest plugin to check import ordering using isort")
    (description
     "This package provides a pytest plugin to check import ordering using
isort.")
    (license license:bsd-3)))

(define-public python-pytest-shutil
  (package
    (name "python-pytest-shutil")
    (version "1.7.0")
    (source
     (origin
       (method url-fetch)
       (uri (pypi-uri "pytest-shutil" version))
       (sha256
        (base32
         "0q8j0ayzmnvlraml6i977ybdq4xi096djhf30n2m1rvnvrhm45nq"))))
    (build-system python-build-system)
    (arguments
     `(#:phases
       (modify-phases %standard-phases
         (add-after 'unpack 'patch-tests
           (lambda _
             (mkdir "/tmp/bin")
             (substitute* "tests/integration/test_cmdline_integration.py"
               (("dirname = '/bin'")
                "dirname = '/tmp/bin'")
               (("bindir = os.path.realpath\\('/bin'\\)")
                "bindir = os.path.realpath('/tmp/bin')"))
             #t)))))
    (propagated-inputs
     `(("python-contextlib2" ,python-contextlib2)
       ("python-execnet" ,python-execnet)
       ("python-pathpy" ,python-pathpy)
       ("python-termcolor" ,python-termcolor)))
    (native-inputs
     `(("python-mock" ,python-mock)
       ("python-pytest" ,python-pytest)
       ("python-setuptools-git" ,python-setuptools-git)))
    (home-page "https://github.com/manahl/pytest-plugins")
    (synopsis "Assorted shell and environment tools for py.test")
    (description
     "This package provides assorted shell and environment tools for the
py.test testing framework.")
    (license license:expat)))

(define-public python-pytest-fixture-config
  (package
    (name "python-pytest-fixture-config")
    (version "1.7.0")
    (source
     (origin
       (method url-fetch)
       (uri (pypi-uri "pytest-fixture-config" version))
       (sha256
        (base32
         "13i1qpz22w3x4dmw8vih5jdnbqfqvl7jiqs0dg764s0zf8bp98a1"))))
    (build-system python-build-system)
    (native-inputs
     `(("python-pytest" ,python-pytest)
       ("python-setuptools-git" ,python-setuptools-git)))
    (home-page "https://github.com/manahl/pytest-plugins")
    (synopsis "Fixture configuration utils for py.test")
    (description
     "This package provides fixture configuration utilities for the py.test
testing framework.")
    (license license:expat)))

(define-public python-pytest-virtualenv
  (package
    (name "python-pytest-virtualenv")
    (version "1.7.0")
    (source
     (origin
       (method url-fetch)
       (uri (pypi-uri "pytest-virtualenv" version))
       (sha256
        (base32
         "03w2zz3crblj1p6i8nq17946hbn3zqp9z7cfnifw47hi4a4fww12"))))
    (build-system python-build-system)
    (arguments
     `(#:phases
       (modify-phases %standard-phases
         ;; Reference the virtualenv executable directly, to avoid the need
         ;; for PYTHONPATH, which gets cleared when instantiating a new
         ;; virtualenv with pytest-virtualenv.
         (add-after 'unpack 'patch-virtualenv-executable
           (lambda* (#:key inputs #:allow-other-keys)
             (let* ((virtualenv (assoc-ref inputs "python-virtualenv"))
                    (virtualenv-bin (string-append virtualenv
                                                   "/bin/virtualenv")))
               (substitute* "pytest_virtualenv.py"
                 (("^DEFAULT_VIRTUALENV_FIXTURE_EXECUTABLE.*$")
                  (format #f "DEFAULT_VIRTUALENV_FIXTURE_EXECUTABLE = '~a'"
                          virtualenv-bin)))
               #t))))))
    (propagated-inputs
     `(("python-pytest-shutil" ,python-pytest-shutil)
       ("python-pytest-fixture-config" ,python-pytest-fixture-config)))
    (inputs
     `(("python-virtualenv" ,python-virtualenv)))
    (native-inputs
     `(("python-mock" ,python-mock)
       ("python-pytest" ,python-pytest)
       ("python-setuptools-git" ,python-setuptools-git)))
    (home-page "https://github.com/manahl/pytest-plugins")
    (synopsis "Virtualenv fixture for py.test")
    (description "This package provides a virtualenv fixture for the py.test
framework.")
    (license license:expat)))

(define-public python-pytest-pycodestyle
  (package
    (name "python-pytest-pycodestyle")
    (version "2.0.0")               ;later versions require python-pytest~=5.4
    (source
     (origin
       (method url-fetch)
       (uri (pypi-uri "pytest-pycodestyle" version))
       (sha256
        (base32
         "02i5gl7pm9cwxk15sn29inz3n8flpj1r3p1l110h43f2na5w8h7z"))))
    (build-system python-build-system)
    (propagated-inputs
     `(("python-pycodestyle" ,python-pycodestyle)))
    (native-inputs
     `(("python-pytest" ,python-pytest)))
    (home-page "https://github.com/henry0312/pytest-pycodestyle")
    (synopsis "Pytest plugin to run pycodestyle")
    (description "This package provides a plugin to run @code{pycodestyle}
for the @code{pytest} framework.")
    (license license:expat)))

(define-public python-pytest-benchmark
  (package
    (name "python-pytest-benchmark")
    (version "3.2.3")
    (source
     (origin
       (method url-fetch)
       (uri (pypi-uri "pytest-benchmark" version))
       (sha256
        (base32
         "0a4mpb4j73dsyk47hd1prrjpfk4r458s102cn80rf253jg818hxd"))))
    (build-system python-build-system)
    (propagated-inputs
     `(("python-py-cpuinfo" ,python-py-cpuinfo)))
    (native-inputs
     `(("python-pathlib2" ,python-pathlib2)
       ("python-pytest" ,python-pytest)))
    (home-page "https://github.com/ionelmc/pytest-benchmark")
    (synopsis "Pytest fixture for benchmarking code")
    (description
     "This package provides a pytest fixture that will group the tests into
rounds that are calibrated to the chosen timer.")
    (license license:bsd-2)))

(define-public python-pytest-services
  (package
    (name "python-pytest-services")
    (version "1.3.1")
    (source
      (origin
        (method url-fetch)
        (uri (pypi-uri "pytest-services" version))
        (sha256
         (base32
          "0b2zfv04w6m3gp2v44ifdhx22vcji069qnn95ry3zcyxib7cjnq3"))))
    (build-system python-build-system)
    (arguments '(#:tests? #f)) ; Tests not included in release tarball.
    (propagated-inputs
     `(("python-psutil" ,python-psutil)
       ("python-requests" ,python-requests)))
    (native-inputs
     `(("python-pytest" ,python-pytest)))
    (home-page "https://github.com/pytest-dev/pytest-services")
    (synopsis "Services plugin for pytest testing framework")
    (description
     "This plugin provides a set of fixtures and utility functions to start
service processes for your tests with pytest.")
    (license license:expat)))

(define-public python-pytest-aiohttp
  (package
    (name "python-pytest-aiohttp")
    (version "0.3.0")
    (source
     (origin
       (method url-fetch)
       (uri (pypi-uri "pytest-aiohttp" version))
       (sha256
        (base32
         "0kx4mbs9bflycd8x9af0idcjhdgnzri3nw1qb0vpfyb3751qaaf9"))))
    (build-system python-build-system)
    (native-inputs
     `(("python-pytest" ,python-pytest)))
    (propagated-inputs
     `(("python-aiohttp" ,python-aiohttp)))
    (home-page "https://github.com/aio-libs/pytest-aiohttp/")
    (synopsis "Pytest plugin for aiohttp support")
    (description "This package provides a pytest plugin for aiohttp support.")
    (license license:asl2.0)))

(define-public python-pytest-flask
  (package
    (name "python-pytest-flask")
    (version "1.0.0")
    (source
     (origin
       (method url-fetch)
       (uri (pypi-uri "pytest-flask" version))
       (sha256
        (base32
         "1hln7mwgdzfi5ma0kqfsi768l7p24jhkw8l0imhifwy08nh7hmjd"))))
    (build-system python-build-system)
    (native-inputs
     `(("python-flask" ,python-flask)
       ("python-pytest" ,python-pytest)
       ("python-setuptools-scm" ,python-setuptools-scm)
       ("python-werkzeug" ,python-werkzeug)))
    (home-page "https://github.com/pytest-dev/pytest-flask")
    (synopsis "Pytest fixtures to test Flask applications")
    (description
     "This pytest plugin provides fixtures to simplify Flask app testing.")
    (license license:expat)))

(define-public python-codacy-coverage
  (package
    (name "python-codacy-coverage")
    (version "1.3.11")
    (source
      (origin
        (method url-fetch)
        (uri (pypi-uri "codacy-coverage" version))
        (sha256
         (base32
          "1g0c0w56xdkmqb8slacyw5qhzrkp814ng3ddh2lkiij58y9m2imr"))))
    (build-system python-build-system)
    (arguments
     `(#:tests? #f)); no tests
    (propagated-inputs
     `(("python-check-manifest" ,python-check-manifest)))
    (home-page "https://github.com/codacy/python-codacy-coverage")
    (synopsis "Codacy coverage reporter for Python")
    (description "This package analyses Python test suites and reports how much
of the code is covered by them.  This tool is part of the Codacy suite for
analysing code quality.")
    (license license:expat)))

(define-public python-httmock
  (package
    (name "python-httmock")
    (version "1.3.0")
    (source
      (origin
        (method url-fetch)
        (uri (pypi-uri "httmock" version))
        (sha256
         (base32
          "1zj1fcm0n6f0wr9mr0hmlqz9430fnr5cdwd5jkcvq9j44bnsrfz0"))))
    (build-system python-build-system)
    (arguments
     `(#:tests? #f)); no tests
    (propagated-inputs
     `(("python-requests" ,python-requests)))
    (home-page "https://github.com/patrys/httmock")
    (synopsis "Mocking library for requests.")
    (description "This package provides a library for replying fake data to
Python software under test, when they make an HTTP query.")
    (license license:asl2.0)))

(define-public python-atpublic
  (package
    (name "python-atpublic")
    (version "1.0")
    (source
      (origin
        (method url-fetch)
        (uri (pypi-uri "atpublic" version))
        (sha256
         (base32
          "0i3sbxkdlbb4560rrlmwwd5y4ps7k73lp4d8wnmd7ag9k426gjkx"))))
    (build-system python-build-system)
    (arguments
     '(#:phases
       (modify-phases %standard-phases
         (add-before 'build 'enable-c-implementation
           (lambda _
             (setenv "ATPUBLIC_BUILD_EXTENSION" "yes")
             #t))
         (replace 'check
           (lambda _
             (invoke "python" "-m" "nose2" "-v"))))))
    (native-inputs
     `(("python-nose2" ,python-nose2)))
    (home-page "https://public.readthedocs.io/")
    (synopsis "@code{@@public} decorator for populating @code{__all__}")
    (description
     "This Python module adds a @code{@@public} decorator and function which
populates a module's @code{__all__} and optionally the module globals.  With
it, the declaration of a name's public export semantics are not separated from
the implementation of that name.")
    (license (list license:asl2.0
                   license:lgpl3))))    ; only for setup_helpers.py

(define-public python-mypy-extensions
  (package
    (name "python-mypy-extensions")
    (version "0.4.3")
    (source
      (origin
        (method url-fetch)
        (uri (pypi-uri "mypy_extensions" version))
        (sha256
         (base32
          "1a04qsk8hd1lqns8w1j7cr0vmvbhg450di5k1i16kqxkbf7q30id"))))
    (build-system python-build-system)
    (arguments `(#:tests? #f)); no tests
    (home-page "https://github.com/python/mypy_extensions")
    (synopsis "Experimental extensions for MyPy.")
    (description "The @code{python-mypy-extensions} module defines experimental
extensions to the standard 'typing' module that are supported by the mypy typechecker.")
    (license license:expat)))

(define-public python-mypy
  (package
    (name "python-mypy")
    (version "0.782")
    (source
      (origin
        (method url-fetch)
        (uri (pypi-uri "mypy" version))
        (sha256
         (base32
          "030kn709515452n6gy2i1d9fg6fyrkmdz228lfpmbslybsld9xzg"))))
    (build-system python-build-system)
    (arguments
     `(#:phases
       (modify-phases %standard-phases
         (replace 'check
           (lambda _
             (invoke "./runtests.py")
             #t)))))
    (native-inputs
     `(("python-attrs" ,python-attrs)
       ("python-flake8" ,python-flake8)
       ("python-flake8-bugbear" ,python-flake8-bugbear)
       ("python-flake8-pyi" ,python-flake8-pyi)
       ("python-importlib-metadata" ,python-importlib-metadata)
       ("python-lxml" ,python-lxml)
       ("python-psutil" ,python-psutil)
       ("python-py" ,python-py)
       ("python-pytest" ,python-pytest)
       ("python-pytest-cov" ,python-pytest-cov)
       ("python-pytest-forked" ,python-pytest-forked)
       ("python-pytest-xdist" ,python-pytest-xdist)
       ("python-setuptools" ,python-setuptools)
       ("python-virtualenv" ,python-virtualenv)))
    (propagated-inputs
     `(("python-mypy-extensions" ,python-mypy-extensions)
       ("python-typing-extensions" ,python-typing-extensions)
       ("python-typed-ast" ,python-typed-ast)))
    (home-page "http://www.mypy-lang.org/")
    (synopsis "Optional static type checker for Python")
    (description "Mypy is an optional static type checker for Python that aims
to combine the benefits of dynamic (or 'duck') typing and static typing.  Mypy combines
the expressive power and convenience of Python with a powerful type system and
compile-time type checking.  Mypy type checks standard Python programs; run them using
any Python VM with basically no runtime overhead.")
    ;; Most of the code is under MIT license; Some files are under Python Software
    ;; Foundation License version 2: stdlib-samples/*, mypyc/lib-rt/pythonsupport.h and
    ;; mypyc/lib-rt/getargs.c
    (license (list license:expat license:psfl))))

debug log:

solving 511bc2b931 ...
found 511bc2b931 in https://yhetil.org/guix-patches/20200722120940.13811-10-tanguy@bioneland.org/
found f80b7634cf in https://yhetil.org/guix-patches/20200722120940.13811-3-tanguy@bioneland.org/
found 2e3cfe05c5 in https://git.savannah.gnu.org/cgit/guix.git
preparing index
index prepared:
100644 2e3cfe05c5c66b3384d5fd0820c565461ac9e735	gnu/packages/python-check.scm

applying [1/2] https://yhetil.org/guix-patches/20200722120940.13811-3-tanguy@bioneland.org/
diff --git a/gnu/packages/python-check.scm b/gnu/packages/python-check.scm
index 2e3cfe05c5..f80b7634cf 100644


applying [2/2] https://yhetil.org/guix-patches/20200722120940.13811-10-tanguy@bioneland.org/
diff --git a/gnu/packages/python-check.scm b/gnu/packages/python-check.scm
index f80b7634cf..511bc2b931 100644

Checking patch gnu/packages/python-check.scm...
Applied patch gnu/packages/python-check.scm cleanly.
Checking patch gnu/packages/python-check.scm...
Applied patch gnu/packages/python-check.scm cleanly.

index at:
100644 511bc2b9312364c768ab60d78e3e0efa13f3b557	gnu/packages/python-check.scm

(*) Git path names are given by the tree(s) the blob belongs to.
    Blobs themselves have no identifier aside from the hash of its contents.^

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