* [bug#75466] [PATCH] gnu: Add python-ngesh.
@ 2025-01-09 16:09 Navid Afkhami
2025-01-16 9:48 ` bug#75466: " Ricardo Wurmus
0 siblings, 1 reply; 2+ messages in thread
From: Navid Afkhami @ 2025-01-09 16:09 UTC (permalink / raw)
To: 75466; +Cc: Navid Afkhami
* gnu/packages/bioinformatics.scm (python-ngesh): New variable.
Change-Id: If51f3075037647e319efa9468331677a845b30cb
---
gnu/packages/bioinformatics.scm | 27 +++++++++++++++++++++++++++
1 file changed, 27 insertions(+)
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index 34a39a48f1..f524b53bad 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -2880,6 +2880,33 @@ (define-public python-metacells
cells).")
(license license:expat)))
+(define-public python-ngesh
+ (package
+ (name "python-ngesh")
+ (version "1.0")
+ (source
+ (origin
+ (method git-fetch)
+ (uri (git-reference
+ (url "https://github.com/tresoldi/ngesh")
+ (commit (string-append "v" version))))
+ (file-name (git-file-name name version))
+ (sha256
+ (base32 "07sj4x95b5hvx57pw24f80sk4ag4hkg1z6wzym3pzi8n5gn85n1z"))))
+ (build-system pyproject-build-system)
+ (propagated-inputs (list python-ete3 python-numpy python-six))
+ (native-inputs (list python-black python-flake8 python-pytest python-twine
+ python-wheel))
+ (home-page "https://github.com/tresoldi/ngesh")
+ (synopsis "Library for phylogenetic tree simulation")
+ (description
+ "Ngesh is a Python library and CLI tool for simulating phylogenetic trees and data.
+It is intended for benchmarking phylogenetic methods, especially in historical
+linguistics andstemmatology. The generation of stochastic phylogenetic trees
+also goes by the name simulationmethods for phylogenetic trees, synthetic data
+generation, or just phylogenetic tree simulation.")
+ (license license:expat)))
+
(define-public python-parabam
(package
(name "python-parabam")
base-commit: 66a1a1fe22aff54973ab5c33957a338b33b8274c
--
2.43.0
^ permalink raw reply related [flat|nested] 2+ messages in thread
* bug#75466: [PATCH] gnu: Add python-ngesh.
2025-01-09 16:09 [bug#75466] [PATCH] gnu: Add python-ngesh Navid Afkhami
@ 2025-01-16 9:48 ` Ricardo Wurmus
0 siblings, 0 replies; 2+ messages in thread
From: Ricardo Wurmus @ 2025-01-16 9:48 UTC (permalink / raw)
To: 75466-done
Applied, thank you!
--
Ricardo
^ permalink raw reply [flat|nested] 2+ messages in thread
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2025-01-09 16:09 [bug#75466] [PATCH] gnu: Add python-ngesh Navid Afkhami
2025-01-16 9:48 ` bug#75466: " Ricardo Wurmus
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