From: Vinicius Monego <monego@posteo.net>
To: 66930@debbugs.gnu.org
Subject: [bug#66930] [PATCH] gnu: Add python-pyamg.
Date: Sat, 4 Nov 2023 15:41:30 +0000 [thread overview]
Message-ID: <2e963833-e5c0-4b45-9e43-d81b506b3e9d@posteo.net> (raw)
In-Reply-To: <39e96e5e211c0a24b03057c4387cc791f2e23e86.1699110356.git.felgru@posteo.net>
Hello,
Em 04/11/2023 12:05, Felix Gruber escreveu:
> * gnu/packages/python-science.scm (python-pyamg): New variable.
>
> Change-Id: Ibf39fecd14d4e6fd72078b217737e5e5cbbf2321
> ---
> gnu/packages/python-science.scm | 36 +++++++++++++++++++++++++++++++++
> 1 file changed, 36 insertions(+)
>
> diff --git a/gnu/packages/python-science.scm b/gnu/packages/python-science.scm
> index 4063797a30..1c2edda118 100644
> --- a/gnu/packages/python-science.scm
> +++ b/gnu/packages/python-science.scm
> @@ -387,6 +387,42 @@ (define-public python-trimesh
> library.")
> (license license:expat)))
>
> +(define-public python-pyamg
> + (package
> + (name "python-pyamg")
> + (version "5.0.0")
I saw that version 5.0.1 is out since Jul 3, 2023. Does it fail to build?
> + (source (origin
> + (method url-fetch)
> + (uri (pypi-uri "pyamg" version))
> + (sha256
> + (base32
> + "0bm0cbqcj5zgs4k7djs5ga98pb95raxxdd674g744hv1iwi6gfga"))))
> + (build-system pyproject-build-system)
> + (propagated-inputs (list pybind11 python-numpy python-scipy))
Pybind11 is usually a native or normal input. Does it have to be
propagated here?
> + (native-inputs (list python-setuptools-scm python-pytest))
> + (arguments
> + (list
> + #:test-flags
> + ;; Test installed package in order to find C++ modules.
> + #~(list "--pyargs" "pyamg.tests")))
> + (home-page "https://github.com/pyamg/pyamg")
> + (synopsis "Algebraic Multigrid Solvers in Python")
> + (description "PyAMG is a Python library of Algebraic Multigrid
> +(AMG) solvers.
> +
> +PyAMG features implementations of:
Nitpick: to avoid repeating "PyAMG", you can say "It" in the second
paragraph and join with the first.
> +@itemize
> +@item Ruge-Stuben (RS) or Classical AMG
> +@item AMG based on Smoothed Aggregation (SA)
> +@item Adaptive Smoothed Aggregation (αSA)
> +@item Compatible Relaxation (CR)
> +@item Krylov methods such as CG, GMRES, FGMRES, BiCGStab, MINRES, etc.
> +@end itemize
> +PyAMG is primarily written in Python with supporting C++ code for
> +performance critical operations.
> +")
Implementation details like in this last sentence about languages and
performance should be transparent to the user and can be omitted.
> + (license license:expat)))
> +
> (define-public python-tspex
> (package
> (name "python-tspex")
>
> base-commit: 9dcd8802f5bc472579f23a38dcf437f8a9ac976c
I also noticed that amg_core contains cpp files generated by the
pyamg/amg_core/bindthem.py script. I'd suggest to grep 'DO NOT EDIT' on
that directory to find the files, delete them in a snippet and rerun the
bindthem.py script in a new phase after unpacking.
Thanks,
Vinicius
next prev parent reply other threads:[~2023-11-04 15:42 UTC|newest]
Thread overview: 3+ messages / expand[flat|nested] mbox.gz Atom feed top
2023-11-04 15:05 [bug#66930] [PATCH] gnu: Add python-pyamg Felix Gruber
2023-11-04 15:41 ` Vinicius Monego [this message]
2024-01-21 17:44 ` bug#66930: " Sharlatan Hellseher
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