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* [bug#72071] [PATCH 0/2] Fix hdf5-parallel-openmpi
@ 2024-07-12  9:40 Luca Cirrottola
  2024-07-12  9:48 ` [bug#72071] [PATCH 1/2] Solve issue https://issues.guix.gnu.org/68313 by updating HDF5 version to 1.14.3 (containing the official fix https://github.com/HDFGroup/hdf5/pull/3421) Luca Cirrottola
                   ` (3 more replies)
  0 siblings, 4 replies; 11+ messages in thread
From: Luca Cirrottola @ 2024-07-12  9:40 UTC (permalink / raw)
  To: 72071; +Cc: Luca Cirrottola

Package hdf5-parallel-openmpi builds often fail with the error reported in https://issues.guix.gnu.org/68313 . The issue has been discussed in https://github.com/open-mpi/ompi/issues/11240 and https://github.com/HDFGroup/hdf5/issues/2196, and solved by https://github.com/HDFGroup/hdf5/pull/3421 that is included in HDF5 release 1.14.3. My proposed solution consists of two commits, the first for updating the HDF5 version in hdf5-parallel-openmpi to 1.14.3, the second for fixing a new test error due to the recipe modifying a file which is used as a test reference (my proposition is to remove this modification, but I don't know why it was introduced in the first place, so thanks for any comment about this).

Luca Cirrottola (2):
  Solve issue https://issues.guix.gnu.org/68313 by updating HDF5 version
    to 1.14.3 (containing the official fix
    https://github.com/HDFGroup/hdf5/pull/3421).
  Fix broken HDF5 test: Do not modify the file src/libhdf5.settings
    generated by the configure script, as it will be checked against a
    new version generated by the test code in
    test/test_check_version.sh.in.

 gnu/packages/maths.scm | 19 +++----------------
 1 file changed, 3 insertions(+), 16 deletions(-)

-- 
2.34.1





^ permalink raw reply	[flat|nested] 11+ messages in thread

end of thread, other threads:[~2024-08-19 10:38 UTC | newest]

Thread overview: 11+ messages (download: mbox.gz follow: Atom feed
-- links below jump to the message on this page --
2024-07-12  9:40 [bug#72071] [PATCH 0/2] Fix hdf5-parallel-openmpi Luca Cirrottola
2024-07-12  9:48 ` [bug#72071] [PATCH 1/2] Solve issue https://issues.guix.gnu.org/68313 by updating HDF5 version to 1.14.3 (containing the official fix https://github.com/HDFGroup/hdf5/pull/3421) Luca Cirrottola
2024-07-12  9:49   ` [bug#72071] [PATCH 2/2] Fix broken HDF5 test: Do not modify the file src/libhdf5.settings generated by the configure script, as it will be checked against a new version generated by the test code in test/test_check_version.sh.in Luca Cirrottola
2024-07-19 16:01 ` [bug#72071] [PATCH 0/2] Fix hdf5-parallel-openmpi Ludovic Courtès
2024-07-25 10:08   ` Luca Cirrottola
2024-07-25 12:49 ` [bug#72071] [PATCH 0/1] Split the patch-settings phase into copy-settings, patch-settings-for-build, restore-settings-for-check, patch-settings-for-install Luca Cirrottola
2024-07-25 12:49   ` [bug#72071] [PATCH 1/1] Backup original settings, so they can be restored before the check phase and patched again before the install phase (since the install-data target depends on this file) Luca Cirrottola
2024-07-29 17:36 ` [bug#72071] [PATCH 0/2] A clean series of patches Luca Cirrottola
2024-07-29 17:36   ` [bug#72071] [PATCH 1/2] Solve issue https://issues.guix.gnu.org/68313 by updating HDF5 version to 1.14.3 (containing the official fix https://github.com/HDFGroup/hdf5/pull/3421) Luca Cirrottola
2024-07-29 17:36   ` [bug#72071] [PATCH 2/2] Skip test_check_version since the patch-settings phase needs to modify the test reference file Luca Cirrottola
2024-08-19 10:37   ` bug#72071: [PATCH 0/2] A clean series of patches Ludovic Courtès

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