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Resent-From: Romain GARBAGE Original-Sender: "Debbugs-submit" Resent-CC: guix-patches@gnu.org Resent-Date: Mon, 11 Mar 2024 11:10:13 +0000 Resent-Message-ID: Resent-Sender: help-debbugs@gnu.org X-GNU-PR-Message: followup 69729 X-GNU-PR-Package: guix-patches X-GNU-PR-Keywords: patch To: 69729@debbugs.gnu.org Cc: Romain GARBAGE Received: via spool by 69729-submit@debbugs.gnu.org id=B69729.171015538910251 (code B ref 69729); Mon, 11 Mar 2024 11:10:13 +0000 Received: (at 69729) by debbugs.gnu.org; 11 Mar 2024 11:09:49 +0000 Received: from localhost ([127.0.0.1]:39061 helo=debbugs.gnu.org) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1rjdXR-0002fB-6k for submit@debbugs.gnu.org; Mon, 11 Mar 2024 07:09:49 -0400 Received: from mail3-relais-sop.national.inria.fr ([192.134.164.104]:58348) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1rjdWn-0002Yk-PN for 69729@debbugs.gnu.org; Mon, 11 Mar 2024 07:09:11 -0400 DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/relaxed; d=inria.fr; s=dc; h=from:to:cc:subject:date:message-id:in-reply-to: references:mime-version:content-transfer-encoding; bh=t3/hV9p6NIkPoLSYmO0IgwRZJcZH6Cc505joS2je9M0=; b=rwf/kp4Qk1kDYo+2e6Tqox1geGdct0S+Oubl+A1svTRzC6NVfhYw/Vf6 sa04PItF3qRkjzU93z1NB74zDL+d2HiupCkEVoGVbNHc3XbKzoJF9wdzP WQIQUhf6IED+Ww0o/TBtg6NQW47RNaSKTqQW/vFDvPuJuGq+OHKc4hxc1 U=; Received-SPF: SoftFail (mail3-relais-sop.national.inria.fr: domain of romain.garbage@inria.fr is inclined to not designate 193.50.110.70 as permitted sender) identity=mailfrom; client-ip=193.50.110.70; receiver=mail3-relais-sop.national.inria.fr; envelope-from="romain.garbage@inria.fr"; x-sender="romain.garbage@inria.fr"; x-conformance=spf_only; x-record-type="v=spf1"; x-record-text="v=spf1 include:mailout.safebrands.com a:basic-mail.safebrands.com a:basic-mail01.safebrands.com a:basic-mail02.safebrands.com ip4:128.93.142.0/24 ip4:192.134.164.0/24 ip4:128.93.162.160 ip4:89.107.174.7 mx ~all" Received-SPF: None (mail3-relais-sop.national.inria.fr: no sender authenticity information available from domain of postmaster@guix-A102.bordeaux.inria.fr) identity=helo; client-ip=193.50.110.70; receiver=mail3-relais-sop.national.inria.fr; envelope-from="romain.garbage@inria.fr"; x-sender="postmaster@guix-A102.bordeaux.inria.fr"; x-conformance=spf_only X-IronPort-AV: E=Sophos;i="6.07,116,1708383600"; d="scan'208";a="81786668" Received: from unknown (HELO guix-A102.bordeaux.inria.fr) ([193.50.110.70]) by mail3-relais-sop.national.inria.fr with ESMTP/TLS/ECDHE-RSA-AES256-GCM-SHA384; 11 Mar 2024 12:08:22 +0100 From: Romain GARBAGE Date: Mon, 11 Mar 2024 12:07:11 +0100 Message-ID: <20240311110750.16327-31-romain.garbage@inria.fr> X-Mailer: git-send-email 2.41.0 In-Reply-To: <20240311110750.16327-2-romain.garbage@inria.fr> References: <20240311110750.16327-2-romain.garbage@inria.fr> MIME-Version: 1.0 Content-Transfer-Encoding: 8bit X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list X-BeenThere: guix-patches@gnu.org List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: guix-patches-bounces+larch=yhetil.org@gnu.org Sender: guix-patches-bounces+larch=yhetil.org@gnu.org X-Migadu-Flow: FLOW_IN X-Migadu-Country: US X-Migadu-Scanner: mx10.migadu.com X-Migadu-Spam-Score: 4.22 X-Spam-Score: 4.22 X-Migadu-Queue-Id: 3B85A8A6C X-TUID: uz2c8ojdcvHw * gnu/packages/bioinformatics.scm (proteinortho): Remove dependency on lapack. --- gnu/packages/bioinformatics.scm | 5 +++-- 1 file changed, 3 insertions(+), 2 deletions(-) diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm index ac2f7c1ade..98bc05d154 100644 --- a/gnu/packages/bioinformatics.scm +++ b/gnu/packages/bioinformatics.scm @@ -8673,7 +8673,9 @@ (define-public proteinortho (substitute* "Makefile" (("INSTALLDIR=.*") (string-append - "INSTALLDIR=" (assoc-ref outputs "out") "/bin\n"))) + "INSTALLDIR=" (assoc-ref outputs "out") "/bin\n")) + (("-llapack -lblas") + "-lopenblas")) #t)) (add-before 'install 'make-install-directory ;; The install directory is not created during 'make install'. @@ -8697,7 +8699,6 @@ (define-public proteinortho ("perl" ,perl) ("python" ,python-wrapper) ("blast+" ,blast+) - ("lapack" ,lapack) ("openblas" ,openblas))) (native-inputs (list which)) -- 2.41.0