From: Vinicius Monego <monego@posteo.net>
To: 63619@debbugs.gnu.org
Cc: Vinicius Monego <monego@posteo.net>
Subject: [bug#63619] [PATCH 9/9] gnu: Add python-pymc.
Date: Sat, 20 May 2023 23:12:41 +0000 [thread overview]
Message-ID: <20230520231241.962799-9-monego@posteo.net> (raw)
In-Reply-To: <20230520231241.962799-1-monego@posteo.net>
* gnu/packages/statistics.scm (python-pymc): New variable.
---
gnu/packages/statistics.scm | 40 +++++++++++++++++++++++++++++++++++++
1 file changed, 40 insertions(+)
diff --git a/gnu/packages/statistics.scm b/gnu/packages/statistics.scm
index c39cf9c0ac..4aac3369ad 100644
--- a/gnu/packages/statistics.scm
+++ b/gnu/packages/statistics.scm
@@ -2192,6 +2192,46 @@ (define-public python-arviz
comparison and diagnostics.")
(license license:asl2.0)))
+(define-public python-pymc
+ (package
+ (name "python-pymc")
+ (version "5.3.1")
+ (source (origin
+ (method git-fetch) ; no tests in PyPI
+ (uri (git-reference
+ (url "https://github.com/pymc-devs/pymc")
+ (commit (string-append "v" version))))
+ (file-name (git-file-name name version))
+ (sha256
+ (base32
+ "1295b0d1zgnpy2hgm0i9jhnnqgzkya7cwcyhq45fdrz65mi9b65h"))))
+ (build-system pyproject-build-system)
+ (arguments
+ ;; Tests are computationally intensive and around 130 tests out of ~2800
+ ;; fail due to a missing .cc file in PyTensor.
+ (list #:tests? #f
+ #:phases #~(modify-phases %standard-phases
+ (add-after 'unpack 'write-permissions
+ (lambda _
+ (setenv "HOME" "/tmp"))))))
+ (native-inputs (list python-pytest-cov))
+ (propagated-inputs (list python-arviz
+ python-cachetools
+ python-cloudpickle
+ python-fastprogress
+ python-numpy
+ python-pandas
+ python-pytensor
+ python-scipy
+ python-typing-extensions))
+ (home-page "https://github.com/pymc-devs/pymc")
+ (synopsis "Library for probabilistic programming in Python")
+ (description
+ "PyMC (formerly PyMC3) is a Python package for Bayesian
+statistical modeling focusing on advanced Markov chain Monte Carlo (MCMC) and
+variational inference (VI) algorithms.")
+ (license license:asl2.0)))
+
(define-public python-patsy
(package
(name "python-patsy")
--
2.34.1
next prev parent reply other threads:[~2023-05-20 23:15 UTC|newest]
Thread overview: 25+ messages / expand[flat|nested] mbox.gz Atom feed top
2023-05-20 23:10 [bug#63619] [PATCH 0/9] Add PyMC Vinicius Monego
2023-05-20 23:12 ` [bug#63619] [PATCH 1/9] gnu: Add python-vega-datasets Vinicius Monego
2023-05-20 23:12 ` [bug#63619] [PATCH 2/9] gnu: Add python-altair Vinicius Monego
2023-05-20 23:12 ` [bug#63619] [PATCH 3/9] gnu: Add python-einops Vinicius Monego
2023-05-20 23:12 ` [bug#63619] [PATCH 4/9] gnu: python-xarray: Update to 2023.5.0 Vinicius Monego
2023-05-20 23:12 ` [bug#63619] [PATCH 5/9] gnu: Add python-xarray-einstats Vinicius Monego
2023-05-20 23:12 ` [bug#63619] [PATCH 6/9] gnu: Add python-arviz Vinicius Monego
2023-05-20 23:12 ` [bug#63619] [PATCH 7/9] gnu: Add python-fastprogress Vinicius Monego
2023-05-20 23:12 ` [bug#63619] [PATCH 8/9] gnu: Add python-pytensor Vinicius Monego
2023-05-20 23:12 ` Vinicius Monego [this message]
2023-06-05 13:01 ` [bug#63619] [PATCH 0/9] Add PyMC Ludovic Courtès
2023-06-09 4:10 ` Vinicius Monego
2023-06-14 21:05 ` Ludovic Courtès
2023-06-14 22:46 ` Vinicius Monego
2023-06-21 21:48 ` Ludovic Courtès
2023-06-25 14:01 ` bug#63619: " Vinicius Monego
2023-06-09 3:49 ` [bug#63619] [PATCH v2 1/9] gnu: Add python-vega-datasets Vinicius Monego
2023-06-09 3:49 ` [bug#63619] [PATCH v2 2/9] gnu: Add python-altair Vinicius Monego
2023-06-09 3:49 ` [bug#63619] [PATCH v2 3/9] gnu: Add python-einops Vinicius Monego
2023-06-09 3:49 ` [bug#63619] [PATCH v2 4/9] gnu: python-xarray: Update to 2023.5.0 Vinicius Monego
2023-06-09 3:49 ` [bug#63619] [PATCH v2 5/9] gnu: Add python-xarray-einstats Vinicius Monego
2023-06-09 3:49 ` [bug#63619] [PATCH v2 6/9] gnu: Add python-arviz Vinicius Monego
2023-06-09 3:49 ` [bug#63619] [PATCH v2 7/9] gnu: Add python-fastprogress Vinicius Monego
2023-06-09 3:49 ` [bug#63619] [PATCH v2 8/9] gnu: Add python-pytensor Vinicius Monego
2023-06-09 3:49 ` [bug#63619] [PATCH v2 9/9] gnu: Add python-pymc Vinicius Monego
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