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From: "Mădălin Ionel Patrașcu" <madalinionel.patrascu@mdc-berlin.de>
To: <62978@debbugs.gnu.org>
Subject: [bug#62978] [PATCH v2 5/6] gnu: Add bpp-phyl-omics.
Date: Fri, 21 Apr 2023 10:16:40 +0200	[thread overview]
Message-ID: <20230421081641.18388-5-madalinionel.patrascu@mdc-berlin.de> (raw)
In-Reply-To: <20230421081641.18388-1-madalinionel.patrascu@mdc-berlin.de>

* gnu/packages/bioinformatics.scm (bpp-phyl-omics): New variable.
---
 gnu/packages/bioinformatics.scm | 28 ++++++++++++++++++++++++++++
 1 file changed, 28 insertions(+)

diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index 576af31ae6..511431fb95 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -2267,6 +2267,34 @@ (define-public bpp-phyl
 library provides phylogenetics-related modules.")
     (license license:cecill-c)))
 
+(define-public bpp-phyl-omics
+  (package
+    (name "bpp-phyl-omics")
+    (version "2.4.1")
+    (source
+      (origin
+       (method git-fetch)
+       (uri (git-reference
+            (url "https://github.com/BioPP/bpp-phyl-omics")
+            (commit (string-append "v" version))))
+        (file-name (git-file-name name version))
+        (sha256
+         (base32 "172psb8njkjwg3cd6gdy5w0mq8f0817v635yw4bk7146aggjzl1h"))))
+    (build-system cmake-build-system)
+    (arguments
+     (list #:tests? #f)) ; No test provided.
+    (inputs
+     (list bpp-core
+           bpp-phyl
+           bpp-seq
+           bpp-seq-omics))
+    (home-page "https://github.com/BioPP/bpp-phyl-omics")
+    (synopsis "Bio++ phylogenetic library genomics components")
+    (description
+     "This library contains the genomics components of the Bio++ phylogenetics
+library.  It is part of the Bio++ project.")
+    (license license:cecill)))
+
 (define-public bpp-popgen
   ;; The last release was in 2014 and the recommended way to install from source
   ;; is to clone the git repository, so we do this.
-- 
2.39.2





  parent reply	other threads:[~2023-04-21  8:18 UTC|newest]

Thread overview: 14+ messages / expand[flat|nested]  mbox.gz  Atom feed  top
2023-04-20 23:02 [bug#62978] gnu: bpp-core, bpp-seq, bpp-phyl: Update to 2.4.1. && gnu: Add bpp-seq-omics, bpp-phyl-omics and maffilter MadalinIonel.Patrascu
2023-04-20 23:05 ` [bug#62978] Mădălin Ionel Patrașcu
2023-04-20 23:05   ` [bug#62978] Mădălin Ionel Patrașcu
2023-04-20 23:05   ` [bug#62978] Mădălin Ionel Patrașcu
2023-04-20 23:05   ` [bug#62978] Mădălin Ionel Patrașcu
2023-04-20 23:05   ` [bug#62978] Mădălin Ionel Patrașcu
2023-04-20 23:05   ` [bug#62978] Mădălin Ionel Patrașcu
2023-04-21  8:16 ` [bug#62978] [PATCH v2 1/6] gnu: bpp-core: Update to 2.4.1 Mădălin Ionel Patrașcu
2023-04-21  8:16   ` [bug#62978] [PATCH v2 2/6] gnu: bpp-seq: " Mădălin Ionel Patrașcu
2023-04-21  8:16   ` [bug#62978] [PATCH v2 3/6] gnu: bpp-phyl: " Mădălin Ionel Patrașcu
2023-04-21  8:16   ` [bug#62978] [PATCH v2 4/6] gnu: Add bpp-seq-omics Mădălin Ionel Patrașcu
2023-04-21  8:16   ` Mădălin Ionel Patrașcu [this message]
2023-04-21  8:16   ` [bug#62978] [PATCH v2 6/6] gnu: Add maffilter Mădălin Ionel Patrașcu
2023-04-21 11:16 ` bug#62978: gnu: bpp-core, bpp-seq, bpp-phyl: Update to 2.4.1. && gnu: Add bpp-seq-omics, bpp-phyl-omics and maffilter Ricardo Wurmus

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