From: "Mădălin Ionel Patrașcu" <madalinionel.patrascu@mdc-berlin.de>
To: <62978@debbugs.gnu.org>
Subject: [bug#62978] [PATCH v2 5/6] gnu: Add bpp-phyl-omics.
Date: Fri, 21 Apr 2023 10:16:40 +0200 [thread overview]
Message-ID: <20230421081641.18388-5-madalinionel.patrascu@mdc-berlin.de> (raw)
In-Reply-To: <20230421081641.18388-1-madalinionel.patrascu@mdc-berlin.de>
* gnu/packages/bioinformatics.scm (bpp-phyl-omics): New variable.
---
gnu/packages/bioinformatics.scm | 28 ++++++++++++++++++++++++++++
1 file changed, 28 insertions(+)
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index 576af31ae6..511431fb95 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -2267,6 +2267,34 @@ (define-public bpp-phyl
library provides phylogenetics-related modules.")
(license license:cecill-c)))
+(define-public bpp-phyl-omics
+ (package
+ (name "bpp-phyl-omics")
+ (version "2.4.1")
+ (source
+ (origin
+ (method git-fetch)
+ (uri (git-reference
+ (url "https://github.com/BioPP/bpp-phyl-omics")
+ (commit (string-append "v" version))))
+ (file-name (git-file-name name version))
+ (sha256
+ (base32 "172psb8njkjwg3cd6gdy5w0mq8f0817v635yw4bk7146aggjzl1h"))))
+ (build-system cmake-build-system)
+ (arguments
+ (list #:tests? #f)) ; No test provided.
+ (inputs
+ (list bpp-core
+ bpp-phyl
+ bpp-seq
+ bpp-seq-omics))
+ (home-page "https://github.com/BioPP/bpp-phyl-omics")
+ (synopsis "Bio++ phylogenetic library genomics components")
+ (description
+ "This library contains the genomics components of the Bio++ phylogenetics
+library. It is part of the Bio++ project.")
+ (license license:cecill)))
+
(define-public bpp-popgen
;; The last release was in 2014 and the recommended way to install from source
;; is to clone the git repository, so we do this.
--
2.39.2
next prev parent reply other threads:[~2023-04-21 8:18 UTC|newest]
Thread overview: 14+ messages / expand[flat|nested] mbox.gz Atom feed top
2023-04-20 23:02 [bug#62978] gnu: bpp-core, bpp-seq, bpp-phyl: Update to 2.4.1. && gnu: Add bpp-seq-omics, bpp-phyl-omics and maffilter MadalinIonel.Patrascu
2023-04-20 23:05 ` [bug#62978] Mădălin Ionel Patrașcu
2023-04-20 23:05 ` [bug#62978] Mădălin Ionel Patrașcu
2023-04-20 23:05 ` [bug#62978] Mădălin Ionel Patrașcu
2023-04-20 23:05 ` [bug#62978] Mădălin Ionel Patrașcu
2023-04-20 23:05 ` [bug#62978] Mădălin Ionel Patrașcu
2023-04-20 23:05 ` [bug#62978] Mădălin Ionel Patrașcu
2023-04-21 8:16 ` [bug#62978] [PATCH v2 1/6] gnu: bpp-core: Update to 2.4.1 Mădălin Ionel Patrașcu
2023-04-21 8:16 ` [bug#62978] [PATCH v2 2/6] gnu: bpp-seq: " Mădălin Ionel Patrașcu
2023-04-21 8:16 ` [bug#62978] [PATCH v2 3/6] gnu: bpp-phyl: " Mădălin Ionel Patrașcu
2023-04-21 8:16 ` [bug#62978] [PATCH v2 4/6] gnu: Add bpp-seq-omics Mădălin Ionel Patrașcu
2023-04-21 8:16 ` Mădălin Ionel Patrașcu [this message]
2023-04-21 8:16 ` [bug#62978] [PATCH v2 6/6] gnu: Add maffilter Mădălin Ionel Patrașcu
2023-04-21 11:16 ` bug#62978: gnu: bpp-core, bpp-seq, bpp-phyl: Update to 2.4.1. && gnu: Add bpp-seq-omics, bpp-phyl-omics and maffilter Ricardo Wurmus
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