From: "Mădălin Ionel Patrașcu" <madalinionel.patrascu@mdc-berlin.de>
To: <62428@debbugs.gnu.org.>
Subject: [bug#62428] [PATCH 05/14] gnu: Add r-org-sc-sgd-db.
Date: Sat, 25 Mar 2023 00:18:51 +0100 [thread overview]
Message-ID: <20230324231900.28367-5-madalinionel.patrascu@mdc-berlin.de> (raw)
In-Reply-To: <20230324231900.28367-1-madalinionel.patrascu@mdc-berlin.de>
* gnu/packages/bioconductor.scm (r-org-sc-sgd-db): New variable.
---
gnu/packages/bioconductor.scm | 21 +++++++++++++++++++++
1 file changed, 21 insertions(+)
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
index 3ae0dba919..21aa3476c0 100644
--- a/gnu/packages/bioconductor.scm
+++ b/gnu/packages/bioconductor.scm
@@ -116,6 +116,27 @@ (define-public r-org-bt-eg-db
based on mapping using Entrez Gene identifiers.")
(license license:artistic2.0)))
+(define-public r-org-sc-sgd-db
+ (package
+ (name "r-org-sc-sgd-db")
+ (version "3.16.0")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (bioconductor-uri "org.Sc.sgd.db" version
+ 'annotation))
+ (sha256
+ (base32 "03b8m4p865kzhjj8zyhmc0ic0n4jyjdl4h8a8xny10b7xs6l0v9f"))))
+ (properties `((upstream-name . "org.Sc.sgd.db")))
+ (build-system r-build-system)
+ (propagated-inputs (list r-annotationdbi))
+ (home-page "https://bioconductor.org/packages/org.Sc.sgd.db")
+ (synopsis "Genome wide annotation for Yeast")
+ (description
+ "Genome wide annotation for Yeast, primarily based on mapping using ORF
+identifiers from @acronym{SGD, Saccharomyces Genome Database}.")
+ (license license:artistic2.0)))
+
(define-public r-pd-mapping50k-xba240
(package
(name "r-pd-mapping50k-xba240")
--
2.39.2
next prev parent reply other threads:[~2023-03-24 23:21 UTC|newest]
Thread overview: 16+ messages / expand[flat|nested] mbox.gz Atom feed top
2023-03-24 22:25 [bug#62428] gnu: Add r-anota2seq, r-hybridmtest, r-apalyzer, r-org-sc-sgd-db, r-apcomplex, r-mdqc, , r-parody, r-arraymvout, r-arrayquality, r-beaddatapackr, r-beadarray, r-arrayqualitymetrics, r-repmis, r-setrng Mădălin Ionel Patrașcu
2023-03-24 23:18 ` [bug#62428] [PATCH 01/14] gnu: Add r-anota2seq Mădălin Ionel Patrașcu
2023-03-24 23:18 ` [bug#62428] [PATCH 02/14] gnu: Add r-repmis Mădălin Ionel Patrașcu
2023-03-24 23:18 ` [bug#62428] [PATCH 03/14] gnu: Add r-hybridmtest Mădălin Ionel Patrașcu
2023-03-24 23:18 ` [bug#62428] Mădălin Ionel Patrașcu
2023-03-24 23:18 ` Mădălin Ionel Patrașcu [this message]
2023-03-24 23:18 ` [bug#62428] [PATCH 06/14] gnu: Add r-apcomplex Mădălin Ionel Patrașcu
2023-03-24 23:18 ` [bug#62428] [PATCH 07/14] gnu: Add r-mdqc Mădălin Ionel Patrașcu
2023-03-24 23:18 ` [bug#62428] [PATCH 08/14] gnu: Add r-parody Mădălin Ionel Patrașcu
2023-03-24 23:18 ` [bug#62428] [PATCH 09/14] gnu: Add r-arraymvout Mădălin Ionel Patrașcu
2023-03-24 23:18 ` [bug#62428] [PATCH 10/14] gnu: Add r-arrayquality Mădălin Ionel Patrașcu
2023-03-24 23:18 ` [bug#62428] [PATCH 11/14] gnu: Add r-setrng Mădălin Ionel Patrașcu
2023-03-24 23:18 ` [bug#62428] [PATCH 12/14] gnu: Add r-beaddatapackr Mădălin Ionel Patrașcu
2023-03-24 23:18 ` [bug#62428] [PATCH 13/14] gnu: Add r-beadarray Mădălin Ionel Patrașcu
2023-03-24 23:19 ` [bug#62428] [PATCH 14/14] gnu: Add r-arrayqualitymetrics Mădălin Ionel Patrașcu
2023-10-04 9:06 ` bug#62428: gnu: Add r-anota2seq … Ricardo Wurmus
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