From: Ricardo Wurmus <rekado@elephly.net>
To: 60009@debbugs.gnu.org
Cc: Ricardo Wurmus <rekado@elephly.net>
Subject: [bug#60009] [PATCH 02/18] gnu: python-hyperopt: Update to 0.2.7.
Date: Mon, 12 Dec 2022 15:27:00 +0100 [thread overview]
Message-ID: <20221212142716.9460-2-rekado@elephly.net> (raw)
In-Reply-To: <20221212142716.9460-1-rekado@elephly.net>
* gnu/packages/machine-learning.scm (python-hyperopt): Update to 0.2.7.
[arguments]: Adjust check phase; disable test_distribution_rvs test.
[build-system]: Use pyproject-build-system.
[propagated-inputs]: Add python-py4j.
[native-inputs]: Remove python-ipython and python-ipyparallel.
---
gnu/packages/machine-learning.scm | 36 ++++++++++++++++---------------
1 file changed, 19 insertions(+), 17 deletions(-)
diff --git a/gnu/packages/machine-learning.scm b/gnu/packages/machine-learning.scm
index fc8de01066..3dbe54a24a 100644
--- a/gnu/packages/machine-learning.scm
+++ b/gnu/packages/machine-learning.scm
@@ -1552,35 +1552,39 @@ (define-public vowpal-wabbit
(define-public python-hyperopt
(package
(name "python-hyperopt")
- (version "0.2.5")
+ (version "0.2.7")
(source
(origin
(method url-fetch)
(uri (pypi-uri "hyperopt" version))
(sha256
- (base32 "1k4ma8ci0bxghw7g4ms944zak1pi83yv2d6bxd7fcslm1zalfq5w"))))
- (build-system python-build-system)
+ (base32 "0jd1ghmm423kbhjvd6pxq92y5vkz25390687fcnd7fshh3jrmy0v"))))
+ (build-system pyproject-build-system)
(arguments
- `(#:phases
- (modify-phases %standard-phases
+ (list
+ #:phases
+ '(modify-phases %standard-phases
(replace 'check
- (lambda* (#:key inputs outputs tests? #:allow-other-keys)
+ (lambda* (#:key tests? #:allow-other-keys)
(when tests?
- (add-installed-pythonpath inputs outputs)
- (invoke "python" "-m" "pytest" "--ignore"
+ (invoke "python" "-m" "pytest"
;; Needs python-pyspark.
- "hyperopt/tests/test_spark.py"
+ "--ignore" "hyperopt/tests/integration/test_spark.py"
;; Needs both python-scikit-learn and python-lightgbm.
- "--ignore" "hyperopt/tests/test_atpe_basic.py"
+ "--ignore" "hyperopt/tests/unit/test_atpe_basic.py"
;; The tests below need python-lightgbm.
- "-k" (string-append "not test_branin"
- " and not test_distractor"
- " and not test_q1lognormal"
- " and not test_quadratic1"
- " and not test_twoarms"))))))))
+ "-k"
+ (string-append "not test_branin"
+ " and not test_distractor"
+ " and not test_q1lognormal"
+ " and not test_quadratic1"
+ " and not test_twoarms"
+ ;; XXX Type error with this version of scipy
+ " and not test_distribution_rvs"))))))))
(propagated-inputs
(list python-cloudpickle
python-future
+ python-py4j
python-networkx
python-numpy
python-scipy
@@ -1588,8 +1592,6 @@ (define-public python-hyperopt
python-tqdm))
(native-inputs
(list python-black
- python-ipython
- python-ipyparallel
python-nose
python-pymongo
python-pytest))
--
2.36.1
next prev parent reply other threads:[~2022-12-12 14:29 UTC|newest]
Thread overview: 29+ messages / expand[flat|nested] mbox.gz Atom feed top
2022-12-12 14:22 [bug#60009] Update python-graphviz and other Python updates Ricardo Wurmus
2022-12-12 14:26 ` [bug#60009] [PATCH 01/18] gnu: python-graphviz: Update to 0.20.1 Ricardo Wurmus
2022-12-12 14:27 ` Ricardo Wurmus [this message]
2022-12-12 14:27 ` [bug#60009] [PATCH 03/18] gnu: python-biopython: Update to 1.80 Ricardo Wurmus
2022-12-12 14:27 ` [bug#60009] [PATCH 04/18] gnu: python-hicmatrix: Update to 16 Ricardo Wurmus
2022-12-12 14:27 ` [bug#60009] [PATCH 05/18] gnu: python-pygenometracks: Update to 3.5 Ricardo Wurmus
2022-12-12 14:27 ` [bug#60009] [PATCH 06/18] gnu: python-hicexplorer: Update to 3.7.2 Ricardo Wurmus
2022-12-12 14:27 ` [bug#60009] [PATCH 07/18] gnu: python-dna-features-viewer: Update to 3.1.1 Ricardo Wurmus
2022-12-12 14:27 ` [bug#60009] [PATCH 08/18] gnu: python-bokeh: Skip failing PIL test Ricardo Wurmus
2022-12-12 19:10 ` zimoun
2022-12-12 20:09 ` Ricardo Wurmus
2022-12-12 20:37 ` Simon Tournier
2022-12-12 23:06 ` Ricardo Wurmus
2022-12-12 14:27 ` [bug#60009] [PATCH 09/18] gnu: sqlite-next: Update to 3.40.0 Ricardo Wurmus
2022-12-12 19:08 ` zimoun
2022-12-12 20:11 ` Ricardo Wurmus
2022-12-12 20:56 ` Simon Tournier
2022-12-12 23:02 ` Ricardo Wurmus
2022-12-12 23:21 ` Simon Tournier
2022-12-12 23:26 ` bug#60009: " Ricardo Wurmus
2022-12-12 14:27 ` [bug#60009] [PATCH 10/18] gnu: python-apsw: Update to 3.40.0.0 Ricardo Wurmus
2022-12-12 14:27 ` [bug#60009] [PATCH 11/18] gnu: python-cgatcore: Update to 0.6.14 Ricardo Wurmus
2022-12-12 14:27 ` [bug#60009] [PATCH 12/18] gnu: python-flask-restful: Update to 0.3.9 Ricardo Wurmus
2022-12-12 14:27 ` [bug#60009] [PATCH 13/18] gnu: python-marshmallow: Update to 3.19.0 Ricardo Wurmus
2022-12-12 14:27 ` [bug#60009] [PATCH 14/18] gnu: python-apispec: Update to 6.0.2 Ricardo Wurmus
2022-12-12 14:27 ` [bug#60009] [PATCH 15/18] gnu: python-pyjwt: Update to 2.6.0 Ricardo Wurmus
2022-12-12 14:27 ` [bug#60009] [PATCH 16/18] gnu: python-flasgger: Update to 0.9.5 Ricardo Wurmus
2022-12-12 14:27 ` [bug#60009] [PATCH 17/18] gnu: seqmagick: Update to 0.8.4 Ricardo Wurmus
2022-12-12 14:27 ` [bug#60009] [PATCH 18/18] gnu: cnvkit: Update to 0.9.9 Ricardo Wurmus
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