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spf=pass (aspmx1.migadu.com: domain of "guix-patches-bounces+larch=yhetil.org@gnu.org" designates 209.51.188.17 as permitted sender) smtp.mailfrom="guix-patches-bounces+larch=yhetil.org@gnu.org" X-Migadu-Spam-Score: 6.35 Authentication-Results: aspmx1.migadu.com; dkim=fail ("headers rsa verify failed") header.d=mdc-berlin.de header.s=mdc header.b=MSwmQ9OI; dmarc=fail reason="SPF not aligned (relaxed)" header.from=mdc-berlin.de (policy=none); spf=pass (aspmx1.migadu.com: domain of "guix-patches-bounces+larch=yhetil.org@gnu.org" designates 209.51.188.17 as permitted sender) smtp.mailfrom="guix-patches-bounces+larch=yhetil.org@gnu.org" X-Migadu-Queue-Id: DE8852FE9E X-Spam-Score: 6.35 X-Migadu-Scanner: scn0.migadu.com X-TUID: uJMsAAN5rXjM * gnu/packages/bioconductor.scm (r-barcodetrackr): New variable. --- gnu/packages/bioconductor.scm | 42 +++++++++++++++++++++++++++++++++++ 1 file changed, 42 insertions(+) diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm index 1e87b190c2..dd3d813398 100644 --- a/gnu/packages/bioconductor.scm +++ b/gnu/packages/bioconductor.scm @@ -2029,6 +2029,48 @@ (define-public r-aneufinder sequencing data.") (license license:artistic2.0))) +(define-public r-barcodetrackr + (package + (name "r-barcodetrackr") + (version "1.4.0") + (source (origin + (method url-fetch) + (uri (bioconductor-uri "barcodetrackR" version)) + (sha256 + (base32 + "0yxa15xkgqazw31vq4wm8v747bw4qb18m6i602pvynk0n5bgg3d3")))) + (properties `((upstream-name . "barcodetrackR"))) + (build-system r-build-system) + (propagated-inputs + (list r-circlize + r-cowplot + r-dplyr + r-ggdendro + r-ggplot2 + r-ggridges + r-magrittr + r-plyr + r-proxy + r-rcolorbrewer + r-rlang + r-s4vectors + r-scales + r-shiny + r-summarizedexperiment + r-tibble + r-tidyr + r-vegan + r-viridis)) + (native-inputs (list r-knitr)) + (home-page "https://github.com/dunbarlabNIH/barcodetrackR") + (synopsis "Functions for analyzing cellular barcoding data") + (description + "This package @code{barcodetrackR} is developed for the analysis and +visualization of clonal tracking data. The required data is formed by samples +and tag abundances in matrix form. Usually from cellular barcoding experiments, +integration site retrieval analyses, or similar technologies.") + (license license:cc0))) + (define-public r-biocversion (package (name "r-biocversion") base-commit: 144a750f8b10e606751bc887bcb09e7fb7ae09ff -- 2.36.1