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spf=pass (aspmx1.migadu.com: domain of "guix-patches-bounces+larch=yhetil.org@gnu.org" designates 209.51.188.17 as permitted sender) smtp.mailfrom="guix-patches-bounces+larch=yhetil.org@gnu.org" X-Migadu-Spam-Score: 6.45 Authentication-Results: aspmx1.migadu.com; dkim=fail ("headers rsa verify failed") header.d=mdc-berlin.de header.s=mdc header.b=ou6qpYY7; dmarc=fail reason="SPF not aligned (relaxed)" header.from=mdc-berlin.de (policy=none); spf=pass (aspmx1.migadu.com: domain of "guix-patches-bounces+larch=yhetil.org@gnu.org" designates 209.51.188.17 as permitted sender) smtp.mailfrom="guix-patches-bounces+larch=yhetil.org@gnu.org" X-Migadu-Queue-Id: 2C200BC26 X-Spam-Score: 6.45 X-Migadu-Scanner: scn0.migadu.com X-TUID: 05f3w+ryWbGO * gnu/packages/bioconductor.scm (r-bader): New variable. --- gnu/packages/bioconductor.scm | 24 ++++++++++++++++++++++++ 1 file changed, 24 insertions(+) diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm index 1e87b190c2..6d65cc1c1f 100644 --- a/gnu/packages/bioconductor.scm +++ b/gnu/packages/bioconductor.scm @@ -2029,6 +2029,30 @@ (define-public r-aneufinder sequencing data.") (license license:artistic2.0))) +(define-public r-bader + (package + (name "r-bader") + (version "1.34.0") + (source (origin + (method url-fetch) + (uri (bioconductor-uri "BADER" version)) + (sha256 + (base32 + "0i5x1r2ns1hxhqk5jyfqird81hck1hllvvgx5bn0rb5vl99g8spm")))) + (properties `((upstream-name . "BADER"))) + (build-system r-build-system) + (home-page "https://bioconductor.org/packages/BADER") + (synopsis + "Bayesian analysis of differential expression in RNA sequencing data") + (description + "The @code{BADER} package is intended for the analysis of RNA sequencing +data. The algorithm fits a Bayesian hierarchical model for RNA sequencing count +data. @code{BADER} returns the posterior probability of differential expression +for each gene between two groups A and B. The joint posterior distribution of +the variables in the model can be returned in the form of posterior samples, +which can be used for further down-stream analyses such as gene set enrichment.") + (license license:gpl2))) + (define-public r-biocversion (package (name "r-biocversion") base-commit: 144a750f8b10e606751bc887bcb09e7fb7ae09ff -- 2.36.1