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spf=pass (aspmx1.migadu.com: domain of "guix-patches-bounces+larch=yhetil.org@gnu.org" designates 209.51.188.17 as permitted sender) smtp.mailfrom="guix-patches-bounces+larch=yhetil.org@gnu.org" X-Migadu-Spam-Score: 6.45 Authentication-Results: aspmx1.migadu.com; dkim=fail ("headers rsa verify failed") header.d=mdc-berlin.de header.s=mdc header.b="QU1lb/e2"; dmarc=fail reason="SPF not aligned (relaxed)" header.from=mdc-berlin.de (policy=none); spf=pass (aspmx1.migadu.com: domain of "guix-patches-bounces+larch=yhetil.org@gnu.org" designates 209.51.188.17 as permitted sender) smtp.mailfrom="guix-patches-bounces+larch=yhetil.org@gnu.org" X-Migadu-Queue-Id: 8911619A4D X-Spam-Score: 6.45 X-Migadu-Scanner: scn0.migadu.com X-TUID: nAA9MuTtvfpf * gnu/packages/bioconductor.scm (r-bac): New variable. --- gnu/packages/bioconductor.scm | 24 ++++++++++++++++++++++++ 1 file changed, 24 insertions(+) diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm index 1e87b190c2..1e86f02128 100644 --- a/gnu/packages/bioconductor.scm +++ b/gnu/packages/bioconductor.scm @@ -2029,6 +2029,30 @@ (define-public r-aneufinder sequencing data.") (license license:artistic2.0))) +(define-public r-bac + (package + (name "r-bac") + (version "1.56.0") + (source (origin + (method url-fetch) + (uri (bioconductor-uri "BAC" version)) + (sha256 + (base32 + "0dkw7438d2sf6nb577dnzija54qs0nhlr47lb73li60fhlnvqmh2")))) + (properties `((upstream-name . "BAC"))) + (build-system r-build-system) + (home-page "https://bioconductor.org/packages/BAC") + (synopsis "Bayesian analysis of Chip-chip experiment") + (description + "This package uses a Bayesian hierarchical model to detect enriched regions +from ChIP-chip experiments. The common goal in analyzing this ChIP-chip data is +to detect DNA-protein interactions from ChIP-chip experiments. The @code{BAC} +package has mainly been tested with @code{Affymetrix} tiling array data. However, +we expect it to work with other platforms (e.g. Agilent, Nimblegen, cDNA, etc.). +Note that @code{BAC} does not deal with normalization, so you will have to +normalize your data before hands.") + (license license:artistic2.0))) + (define-public r-biocversion (package (name "r-biocversion") base-commit: 144a750f8b10e606751bc887bcb09e7fb7ae09ff -- 2.36.1