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spf=pass (aspmx1.migadu.com: domain of "guix-patches-bounces+larch=yhetil.org@gnu.org" designates 209.51.188.17 as permitted sender) smtp.mailfrom="guix-patches-bounces+larch=yhetil.org@gnu.org" X-Migadu-Spam-Score: 6.34 Authentication-Results: aspmx1.migadu.com; dkim=fail ("headers rsa verify failed") header.d=mdc-berlin.de header.s=mdc header.b=FuZa4wfk; dmarc=fail reason="SPF not aligned (relaxed)" header.from=mdc-berlin.de (policy=none); spf=pass (aspmx1.migadu.com: domain of "guix-patches-bounces+larch=yhetil.org@gnu.org" designates 209.51.188.17 as permitted sender) smtp.mailfrom="guix-patches-bounces+larch=yhetil.org@gnu.org" X-Migadu-Queue-Id: 0312C13876 X-Spam-Score: 6.34 X-Migadu-Scanner: scn0.migadu.com X-TUID: QEIl+Pm+lq3Z * gnu/packages/bioconductor.scm (r-attract): New variable. --- gnu/packages/bioconductor.scm | 31 +++++++++++++++++++++++++++++++ 1 file changed, 31 insertions(+) diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm index 1e87b190c2..dcc9503a1b 100644 --- a/gnu/packages/bioconductor.scm +++ b/gnu/packages/bioconductor.scm @@ -2029,6 +2029,37 @@ (define-public r-aneufinder sequencing data.") (license license:artistic2.0))) +(define-public r-attract + (package + (name "r-attract") + (version "1.48.0") + (source (origin + (method url-fetch) + (uri (bioconductor-uri "attract" version)) + (sha256 + (base32 + "0f1fsv278kpnxvqg9qa5rw2k3zr8zws0ab73ldl60h6pv9cy8x82")))) + (properties `((upstream-name . "attract"))) + (build-system r-build-system) + (propagated-inputs + (list r-annotationdbi + r-biobase + r-cluster + r-gostats + r-keggrest + r-limma + r-org-hs-eg-db + r-reactome-db)) + (home-page "https://bioconductor.org/packages/attract") + (synopsis "Finding drivers of Kauffman's attractor landscape") + (description + "This package contains the functions to find the gene expression modules +that represent the drivers of Kauffman's attractor landscape. The modules are +the core attractor pathways that discriminate between different cell types of +groups of interest. Each pathway has a set of synexpression groups, which show +transcriptionally-coordinated changes in gene expression.") + (license license:lgpl2.0+))) + (define-public r-biocversion (package (name "r-biocversion") base-commit: e74fa406e1043547242a8b67ab9907fea7aae6b9 -- 2.36.1