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[arguments]: Add 'fix-tests' phase. [inputs]: Move fenics and python-matplotlib to propagated-inputs. Move python-pkgconfig from here... [native-inputs]: ...to here. [propagated-inputs]: Add python-deprecated (and fenics and python-matplotlib). [description]: Make description more accurate. --- gnu/packages/python-science.scm | 31 +++++++++++++++++++------------ 1 file changed, 19 insertions(+), 12 deletions(-) diff --git a/gnu/packages/python-science.scm b/gnu/packages/python-science.= scm index 676ca6474e..ab307e31af 100644 --- a/gnu/packages/python-science.scm +++ b/gnu/packages/python-science.scm @@ -17,6 +17,7 @@ ;;; Copyright =C2=A9 2021 Felix Gruber ;;; Copyright =C2=A9 2022 Malte Frank Gerdes ;;; Copyright =C2=A9 2022 Guillaume Le Vaillant +;;; Copyright =C2=A9 2022 Paul A. Patience ;;; ;;; This file is part of GNU Guix. ;;; @@ -858,21 +859,28 @@ (define-public python-upsetplot (define-public python-vedo (package (name "python-vedo") - (version "2021.0.3") + (version "2022.2.0") (source (origin (method git-fetch) (uri (git-reference (url "https://github.com/marcomusy/vedo") - (commit version))) + (commit (string-append "v" version)))) (file-name (git-file-name name version)) (sha256 (base32 - "18i3ajh5jzhpc86di15lwh4jv97jhm627ii877sa4yhv6abzjfpn")))) + "1hhv4xc4bphhd1zrnf7r6fpf65xvkdqmb1lh51qg1xpv91h2az0h")))) (build-system python-build-system) (arguments `(#:phases (modify-phases %standard-phases + (add-after 'unpack 'fix-tests + ;; These tests require online data. + (lambda _ + (substitute* "tests/common/test_actors.py" + (("^st =3D .*") "") + (("^assert isinstance\\(st\\.GetTexture\\(\\), .*") "")) + (delete-file "tests/common/test_pyplot.py"))) (add-after 'build 'mpi-setup ,%openmpi-setup) (replace 'check @@ -887,16 +895,16 @@ (define-public python-vedo '("common" "dolfin")))))) ;; Disable the sanity check, which fails with the following error= : ;; - ;; ...checking requirements: ERROR: vedo=3D=3D2021.0.3 Distribu= tionNotFound(Requirement.parse('vtk'), {'vedo'}) + ;; ...checking requirements: ERROR: vedo=3D=3D2022.2.0 Distribu= tionNotFound(Requirement.parse('vtk<9.1.0'), {'vedo'}) (delete 'sanity-check)))) - (inputs ; for the check phase - (list fenics - python-matplotlib + (native-inputs + (list pkg-config python-pkgconfig)) - (native-inputs ; for python-pkgconfig - (list pkg-config)) (propagated-inputs - (list python-numpy + (list fenics + python-deprecated + python-matplotlib + python-numpy vtk)) (home-page "https://github.com/marcomusy/vedo") (synopsis @@ -907,8 +915,7 @@ (define-public python-vedo range of functionalities for working with three-dimensional meshes and point clouds. It can also be used to generate high quality two-dimensional renderings such as scatter plots and histograms. -@code{vedo} is based on @code{vtk} and @code{numpy}, with no other -dependencies.") +@code{vedo} is based on @code{vtk} and @code{numpy}.") ;; vedo is released under the Expat license. Included fonts are ;; covered by the OFL license and textures by the CC0 license. ;; The earth images are in the public domain. -- 2.35.1