From: zimoun <zimon.toutoune@gmail.com>
To: 53017@debbugs.gnu.org
Cc: efraim@flashner.co.il, zimoun <zimon.toutoune@gmail.com>
Subject: [bug#53017] [PATCH 15/17] gnu: Add julia-biosequences.
Date: Tue, 4 Jan 2022 23:47:53 +0100 [thread overview]
Message-ID: <20220104224755.1142897-15-zimon.toutoune@gmail.com> (raw)
In-Reply-To: <20220104224755.1142897-1-zimon.toutoune@gmail.com>
* gnu/packages/julia-xyz.scm (julia-biosequences): New variable.
---
gnu/packages/julia-xyz.scm | 31 +++++++++++++++++++++++++++++++
1 file changed, 31 insertions(+)
diff --git a/gnu/packages/julia-xyz.scm b/gnu/packages/julia-xyz.scm
index 04d0beeb96..e028f37a28 100644
--- a/gnu/packages/julia-xyz.scm
+++ b/gnu/packages/julia-xyz.scm
@@ -387,6 +387,37 @@ (define-public julia-biogenerics
other types or methods used by other BioJulia packages.")
(license license:expat))))
+(define-public julia-biosequences
+ (package
+ (name "julia-biosequences")
+ (version "2.0.5")
+ (source
+ (origin
+ (method git-fetch)
+ (uri (git-reference
+ (url "https://github.com/BioJulia/BioSequences.jl")
+ (commit (string-append "v" version))))
+ (file-name (git-file-name name version))
+ (sha256
+ (base32 "0ns6zk0zvnsf4hlsys9ck2xrn20qck0b0aghh484vc6n458zq2gw"))))
+ (build-system julia-build-system)
+ (propagated-inputs
+ (list julia-biogenerics
+ julia-biosymbols
+ julia-combinatorics
+ julia-indexablebitvectors
+ julia-stablerngs
+ julia-twiddle))
+ (native-inputs
+ (list julia-statsbase
+ julia-yaml))
+ (home-page "https://biojulia.net/BioSequences.jl/stable/")
+ (synopsis "Data types and methods for common operations with biological sequences")
+ (description "This package provides Data types and methods for common
+operations with biological sequences, including DNA, RNA, and amino acid
+sequences.")
+ (license license:expat)))
+
(define-public julia-biosymbols
(package
(name "julia-biosymbols")
--
2.33.1
next prev parent reply other threads:[~2022-01-04 22:50 UTC|newest]
Thread overview: 19+ messages / expand[flat|nested] mbox.gz Atom feed top
2022-01-04 22:45 [bug#53017] [PATCH 00/17] Add julia-biosequences and julia-bioalignments zimoun
2022-01-04 22:47 ` [bug#53017] [PATCH 01/17] gnu: julia-xyz: Adjust style zimoun
2022-01-04 22:47 ` [bug#53017] [PATCH 02/17] build: julia-build-system: Create 'Project.toml' file when missing zimoun
2022-01-04 22:47 ` [bug#53017] [PATCH 03/17] gnu: julia-zygote: Adjust style zimoun
2022-01-04 22:47 ` [bug#53017] [PATCH 04/17] gnu: julia-documentertools: " zimoun
2022-01-04 22:47 ` [bug#53017] [PATCH 05/17] gnu: julia-documenter: " zimoun
2022-01-04 22:47 ` [bug#53017] [PATCH 06/17] gnu: Add julia-biogenerics zimoun
2022-01-04 22:47 ` [bug#53017] [PATCH 07/17] gnu: Add julia-indexablebitvectors zimoun
2022-01-04 22:47 ` [bug#53017] [PATCH 08/17] gnu: Add julia-twiddle zimoun
2022-01-04 22:47 ` [bug#53017] [PATCH 09/17] gnu: Add julia-simd zimoun
2022-01-04 22:47 ` [bug#53017] [PATCH 10/17] gnu: Add julia-scanbyte zimoun
2022-01-04 22:47 ` [bug#53017] [PATCH 11/17] gnu: Add julia-automa zimoun
2022-01-04 22:47 ` [bug#53017] [PATCH 12/17] gnu: Add julia-stringencodings zimoun
2022-01-04 22:47 ` [bug#53017] [PATCH 13/17] gnu: Add julia-yaml zimoun
2022-01-04 22:47 ` [bug#53017] [PATCH 14/17] gnu: Add julia-biosymbols zimoun
2022-01-04 22:47 ` zimoun [this message]
2022-01-04 22:47 ` [bug#53017] [PATCH 16/17] gnu: Add julia-intervaltrees zimoun
2022-01-04 22:47 ` [bug#53017] [PATCH 17/17] gnu: Add julia-bioalignments zimoun
2022-01-10 13:20 ` bug#53017: [PATCH 01/17] gnu: julia-xyz: Adjust style Efraim Flashner
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