From: Vinicius Monego <monego@posteo.net>
To: 48388@debbugs.gnu.org
Cc: Vinicius Monego <monego@posteo.net>
Subject: [bug#48388] [PATCH v5 2/3] gnu: Add xgboost.
Date: Sat, 25 Sep 2021 19:36:50 +0000 [thread overview]
Message-ID: <20210925193651.155981-2-monego@posteo.net> (raw)
In-Reply-To: <20210925193651.155981-1-monego@posteo.net>
* gnu/packages/machine-learning.scm (xgboost): New variable.
* gnu/packages/patches/xgboost-use-system-dmlc-core.patch: New patch.
* gnu/local.mk (dist_patch_DATA): Add it.
---
gnu/local.mk | 1 +
gnu/packages/machine-learning.scm | 32 +++++++++++++++++
.../xgboost-use-system-dmlc-core.patch | 34 +++++++++++++++++++
3 files changed, 67 insertions(+)
create mode 100644 gnu/packages/patches/xgboost-use-system-dmlc-core.patch
diff --git a/gnu/local.mk b/gnu/local.mk
index 7d706f6f6e..22fc393f0e 100644
--- a/gnu/local.mk
+++ b/gnu/local.mk
@@ -1888,6 +1888,7 @@ dist_patch_DATA = \
%D%/packages/patches/xf86-video-voodoo-pcitag.patch \
%D%/packages/patches/xfce4-panel-plugins.patch \
%D%/packages/patches/xfce4-settings-defaults.patch \
+ %D%/packages/patches/xgboost-use-system-dmlc-core.patch \
%D%/packages/patches/xmonad-dynamic-linking.patch \
%D%/packages/patches/xnnpack-system-libraries.patch \
%D%/packages/patches/xplanet-1.3.1-cxx11-eof.patch \
diff --git a/gnu/packages/machine-learning.scm b/gnu/packages/machine-learning.scm
index a4768211a0..454088b1a5 100644
--- a/gnu/packages/machine-learning.scm
+++ b/gnu/packages/machine-learning.scm
@@ -2338,6 +2338,38 @@ offers the bricks to build efficient and scalable distributed machine
learning libraries.")
(license license:asl2.0)))
+(define-public xgboost
+ (package
+ (name "xgboost")
+ (version "1.4.2")
+ (source
+ (origin
+ (method git-fetch)
+ (uri (git-reference
+ (url "https://github.com/dmlc/xgboost")
+ (commit (string-append "v" version))))
+ (file-name (git-file-name name version))
+ (patches (search-patches "xgboost-use-system-dmlc-core.patch"))
+ (sha256
+ (base32 "00liz816ahk9zj3jv3m2fqwlf6xxfbgvpmpl72iklx32vl192w5d"))))
+ (build-system cmake-build-system)
+ (arguments
+ `(#:configure-flags (list "-DGOOGLE_TEST=ON")))
+ (native-inputs
+ `(("googletest" ,googletest)
+ ("python" ,python-wrapper)))
+ (inputs
+ `(("dmlc-core" ,dmlc-core)))
+ (home-page "https://xgboost.ai/")
+ (synopsis "Gradient boosting (GBDT, GBRT or GBM) library")
+ (description
+ "XGBoost is an optimized distributed gradient boosting library designed
+to be highly efficient, flexible and portable. It implements machine learning
+algorithms under the Gradient Boosting framework. XGBoost provides a parallel
+tree boosting (also known as GBDT, GBM) that solve many data science problems
+in a fast and accurate way.")
+ (license license:asl2.0)))
+
(define-public python-iml
(package
(name "python-iml")
diff --git a/gnu/packages/patches/xgboost-use-system-dmlc-core.patch b/gnu/packages/patches/xgboost-use-system-dmlc-core.patch
new file mode 100644
index 0000000000..c654694fec
--- /dev/null
+++ b/gnu/packages/patches/xgboost-use-system-dmlc-core.patch
@@ -0,0 +1,34 @@
+From 34167cc105e47589b86b6f62da76e0ab744002dd Mon Sep 17 00:00:00 2001
+From: Vinicius Monego <monego@posteo.net>
+Date: Tue, 11 May 2021 19:35:30 -0300
+Subject: [PATCH] Use dmlc-core from Guix.
+
+---
+This patch is a subset of the following Debian patch: https://sources.debian.org/src/xgboost/1.2.1-1/debian/patches/cmake.patch/
+
+Rabit is now developed as part of xgboost, so we don't build it separately.
+
+ CMakeLists.txt | 8 +++-----
+ 1 file changed, 3 insertions(+), 5 deletions(-)
+
+diff --git a/CMakeLists.txt b/CMakeLists.txt
+index 6cc19fbd..3b42bc17 100644
+--- a/CMakeLists.txt
++++ b/CMakeLists.txt
+@@ -150,11 +150,9 @@ endif (USE_OPENMP)
+
+ # dmlc-core
+ msvc_use_static_runtime()
+-add_subdirectory(${xgboost_SOURCE_DIR}/dmlc-core)
+-set_target_properties(dmlc PROPERTIES
+- CXX_STANDARD 14
+- CXX_STANDARD_REQUIRED ON
+- POSITION_INDEPENDENT_CODE ON)
++add_library(dmlc SHARED IMPORTED)
++find_library(DMLC_LIBRARY dmlc)
++set_property(TARGET dmlc PROPERTY IMPORTED_LOCATION "${DMLC_LIBRARY}")
+ if (MSVC)
+ target_compile_options(dmlc PRIVATE
+ -D_CRT_SECURE_NO_WARNINGS -D_CRT_SECURE_NO_DEPRECATE)
+--
+2.31.1
--
2.30.2
next prev parent reply other threads:[~2021-09-25 19:38 UTC|newest]
Thread overview: 14+ messages / expand[flat|nested] mbox.gz Atom feed top
2021-05-12 23:56 [bug#48388] [PATCH 0/3] Add xgboost Vinicius Monego
2021-05-12 23:58 ` [bug#48388] [PATCH 1/3] gnu: Add dmlc-core Vinicius Monego
2021-05-12 23:58 ` [bug#48388] [PATCH 2/3] gnu: Add xgboost Vinicius Monego
2021-05-12 23:58 ` [bug#48388] [PATCH 3/3] gnu: Add python-xgboost Vinicius Monego
2021-05-13 15:29 ` [bug#48388] [PATCH v2 2/3] gnu: Add xgboost Vinicius Monego
2021-05-13 15:29 ` [bug#48388] [PATCH v2 3/3] gnu: Add python-xgboost Vinicius Monego
2021-06-27 17:30 ` [bug#48388] [PATCH v3 1/3] gnu: Add dmlc-core Vinicius Monego
2021-06-27 17:30 ` [bug#48388] [PATCH v3 2/3] gnu: Add xgboost Vinicius Monego
2021-06-27 17:30 ` [bug#48388] [PATCH v3 3/3] gnu: Add python-xgboost Vinicius Monego
2021-06-27 23:11 ` [bug#48388] [PATCH v4 " Vinicius Monego
2021-09-25 19:36 ` [bug#48388] [PATCH v5 1/3] gnu: Add dmlc-core Vinicius Monego
2021-09-25 19:36 ` Vinicius Monego [this message]
2021-09-25 19:36 ` [bug#48388] [PATCH v5 3/3] gnu: Add python-xgboost Vinicius Monego
2021-09-25 20:14 ` bug#48388: [PATCH v5 1/3] gnu: Add dmlc-core Leo Famulari
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