From: "Mădălin Ionel Patrașcu" <madalinionel.patrascu@mdc-berlin.de>
To: <46955@debbugs.gnu.org>
Cc: rekado@elephly.net,
"Mădălin Ionel Patrașcu" <madalinionel.patrascu@mdc-berlin.de>
Subject: [bug#46955] [PATCH 1/3] gnu: Add python-sparse.
Date: Sun, 6 Jun 2021 02:06:49 +0200 [thread overview]
Message-ID: <20210606000651.28252-1-madalinionel.patrascu@mdc-berlin.de> (raw)
In-Reply-To: <76dfa82e-53e2-c4fc-d002-df71f348cdc8@mdc-berlin.de>
* gnu/packages/python-xyz.scm(python-sparse): New variable.
---
gnu/packages/python-xyz.scm | 47 ++++++++++++++++++++++++++++++++++++-
1 file changed, 46 insertions(+), 1 deletion(-)
diff --git a/gnu/packages/python-xyz.scm b/gnu/packages/python-xyz.scm
index b63c2852d5..a4fe31a01f 100644
--- a/gnu/packages/python-xyz.scm
+++ b/gnu/packages/python-xyz.scm
@@ -67,7 +67,7 @@
;;; Copyright © 2019, 2020 Giacomo Leidi <goodoldpaul@autistici.org>
;;; Copyright © 2019 Wiktor Żelazny <wzelazny@vurv.cz>
;;; Copyright © 2019, 2020 Tanguy Le Carrour <tanguy@bioneland.org>
-;;; Copyright © 2019 Mădălin Ionel Patrașcu <madalinionel.patrascu@mdc-berlin.de>
+;;; Copyright © 2019, 2021 Mădălin Ionel Patrașcu <madalinionel.patrascu@mdc-berlin.de>
;;; Copyright © 2020 Riku Viitanen <riku.viitanen@protonmail.com>
;;; Copyright © 2020 Jakub Kądziołka <kuba@kadziolka.net>
;;; Copyright © 2020 sirgazil <sirgazil@zoho.com>
@@ -5147,6 +5147,51 @@ objects.")
(define-public python2-colormath
(package-with-python2 python-colormath))
+(define-public python-sparse
+ (package
+ (name "python-sparse")
+ (version "0.12.0")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (pypi-uri "sparse" version))
+ (sha256
+ (base32
+ "05lmzckv69cvxavhdr36k803bgr5dl04cppglid1l880xswc759c"))))
+ (build-system python-build-system)
+ (arguments
+ `(#:phases
+ (modify-phases %standard-phases
+ (replace 'check
+ (lambda* (#:key tests? #:allow-other-keys)
+ (when tests?
+ (invoke "python" "-m" "pytest" "-v")))))))
+ (propagated-inputs
+ `(("python-numba" ,python-numba)
+ ("python-numpy" ,python-numpy)
+ ("python-scipy" ,python-scipy)))
+ (native-inputs
+ `(("python-dask" ,python-dask)
+ ("python-pytest" ,python-pytest)
+ ("python-pytest-black" ,python-pytest-black)
+ ("python-pytest-cov" ,python-pytest-cov)))
+ (home-page "https://github.com/pydata/sparse/")
+ (synopsis "Library for multi-dimensional sparse arrays")
+ (description
+ "This package implements sparse arrays of arbitrary dimension on top of
+@code{numpy} and @code{scipy.sparse}. Sparse array is a matrix in which most
+of the elements are zero. @code{python-sparse} generalizes the
+@code{scipy.sparse.coo_matrix} and @code{scipy.sparse.dok_matrix} layouts, but
+extends beyond just rows and columns to an arbitrary number of dimensions.
+Additionally, this project maintains compatibility with the
+@code{numpy.ndarray} interface rather than the @code{numpy.matrix} interface
+used in @code{scipy.sparse}. These differences make this project useful in
+certain situations where @code{scipy.sparse} matrices are not well suited, but
+it should not be considered a full replacement. It lacks layouts that are not
+easily generalized like @dfn{compressed sparse row/column}(CSR/CSC) and
+depends on @code{scipy.sparse} for some computations.")
+ (license license:bsd-3)))
+
(define-public python-spectra
(package
(name "python-spectra")
--
2.31.1
next prev parent reply other threads:[~2021-06-06 0:08 UTC|newest]
Thread overview: 17+ messages / expand[flat|nested] mbox.gz Atom feed top
2021-03-06 0:54 [bug#46955] (no subject) Mădălin Ionel Patrașcu
2021-03-06 0:57 ` [bug#46955] [PATCH 1/2] gnu: Add python-sparse Mădălin Ionel Patrașcu
2021-03-06 0:57 ` [bug#46955] [PATCH 2/2] gnu: python-cooler: Update to 0.8.10 Mădălin Ionel Patrașcu
2021-04-01 15:09 ` Ricardo Wurmus
2021-04-01 15:07 ` [bug#46955] [PATCH 1/2] gnu: Add python-sparse Ricardo Wurmus
2021-04-01 15:10 ` Ricardo Wurmus
[not found] ` <handler.46955.B.16149920915786.ack@debbugs.gnu.org>
2021-06-03 23:23 ` [bug#46955] [ext] bug#46955: Acknowledgement ((no subject)) Mădălin Ionel Patrașcu
2021-06-03 23:25 ` [bug#46955] [PATCH 1/3] gnu: Add python-sparse Mădălin Ionel Patrașcu
2021-06-03 23:25 ` [bug#46955] [PATCH 2/3] gnu: Add python-ipytree Mădălin Ionel Patrașcu
2021-06-03 23:25 ` [bug#46955] [PATCH 3/3] gnu: python-cooler: Update to 0.8.11 Mădălin Ionel Patrașcu
2021-06-05 10:06 ` Maxime Devos
2021-06-06 0:03 ` [bug#46955] [ext] " Mădălin Ionel Patrașcu
2021-06-06 0:06 ` Mădălin Ionel Patrașcu [this message]
2021-06-06 0:06 ` [bug#46955] [PATCH 2/3] gnu: Add python-ipytree Mădălin Ionel Patrașcu
2021-06-06 6:23 ` Ricardo Wurmus
2021-06-06 0:06 ` [bug#46955] [PATCH 3/3] gnu: python-cooler: Update to 0.8.11 Mădălin Ionel Patrașcu
2021-06-06 6:36 ` bug#46955: " Ricardo Wurmus
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