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spf=pass (aspmx1.migadu.com: domain of guix-patches-bounces@gnu.org designates 209.51.188.17 as permitted sender) smtp.mailfrom=guix-patches-bounces@gnu.org X-Migadu-Spam-Score: 2.66 Authentication-Results: aspmx1.migadu.com; dkim=fail ("headers rsa verify failed") header.d=gmail.com header.s=20161025 header.b=dhaVv47t; dmarc=fail reason="SPF not aligned (relaxed)" header.from=gmail.com (policy=none); spf=pass (aspmx1.migadu.com: domain of guix-patches-bounces@gnu.org designates 209.51.188.17 as permitted sender) smtp.mailfrom=guix-patches-bounces@gnu.org X-Migadu-Queue-Id: 9D18A2201D X-Spam-Score: 2.66 X-Migadu-Scanner: scn0.migadu.com X-TUID: hMQvr5a9wEcV * gnu/packages/bioinformatics.scm (r-complexheatmap): Move from here... * gnu/packages/bioconductor.scm (r-complexheatmap): ...to here. --- gnu/packages/bioconductor.scm | 39 +++++++++++++++++++++++++++++++++ gnu/packages/bioinformatics.scm | 39 --------------------------------- 2 files changed, 39 insertions(+), 39 deletions(-) diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm index f6d3ef897a..92eb5a0906 100644 --- a/gnu/packages/bioconductor.scm +++ b/gnu/packages/bioconductor.scm @@ -2082,6 +2082,45 @@ genome data packages and support for efficient SNP representation.") analysis.") (license license:artistic2.0))) +(define-public r-complexheatmap + (package + (name "r-complexheatmap") + (version "2.6.2") + (source + (origin + (method url-fetch) + (uri (bioconductor-uri "ComplexHeatmap" version)) + (sha256 + (base32 + "1nx1xxpq8zrvi990v9fmvx3msl85pdz5dp1gp6m78q6i4s2alg5x")))) + (properties + `((upstream-name . "ComplexHeatmap"))) + (build-system r-build-system) + (propagated-inputs + `(("r-cairo" ,r-cairo) + ("r-circlize" ,r-circlize) + ("r-clue" ,r-clue) + ("r-colorspace" ,r-colorspace) + ("r-digest" ,r-digest) + ("r-getoptlong" ,r-getoptlong) + ("r-globaloptions" ,r-globaloptions) + ("r-iranges" ,r-iranges) + ("r-matrixstats" ,r-matrixstats) + ("r-png" ,r-png) + ("r-rcolorbrewer" ,r-rcolorbrewer) + ("r-s4vectors" ,r-s4vectors))) + (native-inputs + `(("r-knitr" ,r-knitr))) + (home-page + "https://github.com/jokergoo/ComplexHeatmap") + (synopsis "Making Complex Heatmaps") + (description + "Complex heatmaps are efficient to visualize associations between +different sources of data sets and reveal potential structures. This package +provides a highly flexible way to arrange multiple heatmaps and supports +self-defined annotation graphics.") + (license license:gpl2+))) + (define-public r-deseq (package (name "r-deseq") diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm index daf1fb6958..acaf41acc4 100644 --- a/gnu/packages/bioinformatics.scm +++ b/gnu/packages/bioinformatics.scm @@ -9028,45 +9028,6 @@ distributed by file or by range. User defined mapper and reducer functions provide added flexibility for data combination and manipulation.") (license license:artistic2.0))) -(define-public r-complexheatmap - (package - (name "r-complexheatmap") - (version "2.6.2") - (source - (origin - (method url-fetch) - (uri (bioconductor-uri "ComplexHeatmap" version)) - (sha256 - (base32 - "1nx1xxpq8zrvi990v9fmvx3msl85pdz5dp1gp6m78q6i4s2alg5x")))) - (properties - `((upstream-name . "ComplexHeatmap"))) - (build-system r-build-system) - (propagated-inputs - `(("r-cairo" ,r-cairo) - ("r-circlize" ,r-circlize) - ("r-clue" ,r-clue) - ("r-colorspace" ,r-colorspace) - ("r-digest" ,r-digest) - ("r-getoptlong" ,r-getoptlong) - ("r-globaloptions" ,r-globaloptions) - ("r-iranges" ,r-iranges) - ("r-matrixstats" ,r-matrixstats) - ("r-png" ,r-png) - ("r-rcolorbrewer" ,r-rcolorbrewer) - ("r-s4vectors" ,r-s4vectors))) - (native-inputs - `(("r-knitr" ,r-knitr))) - (home-page - "https://github.com/jokergoo/ComplexHeatmap") - (synopsis "Making Complex Heatmaps") - (description - "Complex heatmaps are efficient to visualize associations between -different sources of data sets and reveal potential structures. This package -provides a highly flexible way to arrange multiple heatmaps and supports -self-defined annotation graphics.") - (license license:gpl2+))) - (define-public r-dirichletmultinomial (package (name "r-dirichletmultinomial") -- 2.30.1