From mboxrd@z Thu Jan 1 00:00:00 1970 Return-Path: Received: from mp2 ([2001:41d0:2:4a6f::]) (using TLSv1.3 with cipher TLS_AES_256_GCM_SHA384 (256/256 bits)) by ms11 with LMTPS id 4Lk3LnY0h18PZwAA0tVLHw (envelope-from ) for ; Wed, 14 Oct 2020 17:25:10 +0000 Received: from aspmx1.migadu.com ([2001:41d0:2:4a6f::]) (using TLSv1.3 with cipher TLS_AES_256_GCM_SHA384 (256/256 bits)) by mp2 with LMTPS id gNn5KXY0h1/dbgAAB5/wlQ (envelope-from ) for ; Wed, 14 Oct 2020 17:25:10 +0000 Received: from lists.gnu.org (lists.gnu.org [209.51.188.17]) (using TLSv1.2 with cipher ECDHE-RSA-AES256-GCM-SHA384 (256/256 bits)) (No client certificate requested) by aspmx1.migadu.com (Postfix) with ESMTPS id E2BC99400C7 for ; Wed, 14 Oct 2020 17:25:09 +0000 (UTC) Received: from localhost ([::1]:55396 helo=lists1p.gnu.org) by lists.gnu.org with esmtp (Exim 4.90_1) (envelope-from ) id 1kSkWS-0006fU-Mo for larch@yhetil.org; Wed, 14 Oct 2020 13:25:08 -0400 Received: from eggs.gnu.org ([2001:470:142:3::10]:47234) by lists.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from ) id 1kSkWM-0006fK-Ja for guix-patches@gnu.org; Wed, 14 Oct 2020 13:25:02 -0400 Received: from debbugs.gnu.org ([209.51.188.43]:41379) by eggs.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_128_GCM_SHA256:128) (Exim 4.90_1) (envelope-from ) id 1kSkWM-0003S3-9P for guix-patches@gnu.org; Wed, 14 Oct 2020 13:25:02 -0400 Received: from Debian-debbugs by debbugs.gnu.org with local (Exim 4.84_2) (envelope-from ) id 1kSkWM-000153-7x for guix-patches@gnu.org; Wed, 14 Oct 2020 13:25:02 -0400 X-Loop: help-debbugs@gnu.org Subject: [bug#43991] [PATCH] gnu: r-sf: Use proj instead of proj.4. 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That's all we know. X-Spam_score_int: -20 X-Spam_score: -2.1 X-Spam_bar: -- X-Spam_report: (-2.1 / 5.0 requ) BAYES_00=-1.9, DKIM_SIGNED=0.1, DKIM_VALID=-0.1, DKIM_VALID_AU=-0.1, DKIM_VALID_EF=-0.1, SPF_HELO_PASS=-0.001, SPF_PASS=-0.001 autolearn=ham autolearn_force=no X-Spam_action: no action X-Spam-Score: -1.4 (-) X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list X-Spam-Score: -0.1 (/) X-BeenThere: guix-patches@gnu.org List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: guix-patches-bounces+larch=yhetil.org@gnu.org Sender: "Guix-patches" X-Scanner: scn0 Authentication-Results: aspmx1.migadu.com; dkim=fail (rsa verify failed) header.d=freeshell.de header.s=mail header.b=fKyQe6Sp; dmarc=fail reason="SPF not aligned (relaxed)" header.from=freeshell.de (policy=none); spf=pass (aspmx1.migadu.com: domain of guix-patches-bounces@gnu.org designates 209.51.188.17 as permitted sender) smtp.mailfrom=guix-patches-bounces@gnu.org X-Spam-Score: 1.09 X-TUID: ulI6mZt6xVGN From: Wiktor Żelazny * gnu/packages/cran.scm (r-sf)[inputs]: Replace proj.4 with proj, and add sqlite. This addresses segfaults while loading vector GIS data from a file. --- gnu/packages/cran.scm | 6 ++++-- 1 file changed, 4 insertions(+), 2 deletions(-) diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm index 59a409f8e9..252699c691 100644 --- a/gnu/packages/cran.scm +++ b/gnu/packages/cran.scm @@ -17,7 +17,7 @@ ;;; Copyright © 2018 Marius Bakke ;;; Copyright © 2018, 2019 Brett Gilio ;;; Copyright © 2019 Nicolò Balzarotti -;;; Copyright © 2019 Wiktor Żelazny +;;; Copyright © 2019, 2020 Wiktor Żelazny ;;; Copyright © 2019 Arne Babenhauserheide ;;; Copyright © 2019, 2020 Efraim Flashner ;;; Copyright © 2020 Todor Kondić @@ -90,6 +90,7 @@ #:use-module (gnu packages pulseaudio) ;libsndfile #:use-module (gnu packages python) #:use-module (gnu packages python-xyz) + #:use-module (gnu packages sqlite) #:use-module (gnu packages statistics) #:use-module (gnu packages tcl) #:use-module (gnu packages tls) @@ -13957,7 +13958,8 @@ tessellation.") (inputs `(("gdal" ,gdal) ("geos" ,geos) - ("proj" ,proj.4) + ("proj" ,proj) + ("sqlite" ,sqlite) ("zlib" ,zlib))) (propagated-inputs `(("r-classint" ,r-classint) -- 2.28.0