From mboxrd@z Thu Jan 1 00:00:00 1970 Return-Path: Received: from mp2 ([2001:41d0:2:bcc0::]) (using TLSv1.3 with cipher TLS_AES_256_GCM_SHA384 (256/256 bits)) by ms11 with LMTPS id AGslJBC+W19mLQAA0tVLHw (envelope-from ) for ; Fri, 11 Sep 2020 18:12:32 +0000 Received: from aspmx2.migadu.com ([2001:41d0:2:bcc0::]) (using TLSv1.3 with cipher TLS_AES_256_GCM_SHA384 (256/256 bits)) by mp2 with LMTPS id IId7HhC+W18cUwAAB5/wlQ (envelope-from ) for ; Fri, 11 Sep 2020 18:12:32 +0000 Received: from lists.gnu.org (lists.gnu.org [209.51.188.17]) (using TLSv1.2 with cipher ECDHE-RSA-AES256-GCM-SHA384 (256/256 bits)) (No client certificate requested) by aspmx2.migadu.com (Postfix) with ESMTPS id 1BF676800E1 for ; Fri, 11 Sep 2020 18:12:32 +0000 (UTC) Received: from localhost ([::1]:53510 helo=lists1p.gnu.org) by lists.gnu.org with esmtp (Exim 4.90_1) (envelope-from ) id 1kGnXD-0000wg-1D for larch@yhetil.org; Fri, 11 Sep 2020 14:12:31 -0400 Received: from eggs.gnu.org ([2001:470:142:3::10]:54260) by lists.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from ) id 1kGnUq-0005Ik-2d for guix-patches@gnu.org; Fri, 11 Sep 2020 14:10:04 -0400 Received: from debbugs.gnu.org ([209.51.188.43]:33875) by eggs.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_128_GCM_SHA256:128) (Exim 4.90_1) (envelope-from ) id 1kGnUp-00068U-P9 for guix-patches@gnu.org; Fri, 11 Sep 2020 14:10:03 -0400 Received: from Debian-debbugs by debbugs.gnu.org with local (Exim 4.84_2) (envelope-from ) id 1kGnUp-0005O2-Kd for guix-patches@gnu.org; Fri, 11 Sep 2020 14:10:03 -0400 X-Loop: help-debbugs@gnu.org Subject: [bug#43345] [PATCH 04/12] gnu: r-igraph: Move to (gnu packages cran). Resent-From: zimoun Original-Sender: "Debbugs-submit" Resent-CC: guix-patches@gnu.org Resent-Date: Fri, 11 Sep 2020 18:10:03 +0000 Resent-Message-ID: Resent-Sender: help-debbugs@gnu.org X-GNU-PR-Message: followup 43345 X-GNU-PR-Package: guix-patches X-GNU-PR-Keywords: patch To: 43345@debbugs.gnu.org Cc: zimoun Received: via spool by 43345-submit@debbugs.gnu.org id=B43345.159984774920554 (code B ref 43345); Fri, 11 Sep 2020 18:10:03 +0000 Received: (at 43345) by debbugs.gnu.org; 11 Sep 2020 18:09:09 +0000 Received: from localhost ([127.0.0.1]:45401 helo=debbugs.gnu.org) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1kGnTw-0005LF-Pt for submit@debbugs.gnu.org; Fri, 11 Sep 2020 14:09:09 -0400 Received: from mail-wr1-f42.google.com ([209.85.221.42]:40507) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1kGnTq-0005JV-GQ for 43345@debbugs.gnu.org; Fri, 11 Sep 2020 14:09:04 -0400 Received: by mail-wr1-f42.google.com with SMTP id j2so12342202wrx.7 for <43345@debbugs.gnu.org>; Fri, 11 Sep 2020 11:09:02 -0700 (PDT) DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/relaxed; d=gmail.com; s=20161025; h=from:to:cc:subject:date:message-id:in-reply-to:references :mime-version:content-transfer-encoding; bh=SWG+jXUDXHU/v2lV0aDlLD0IncOBQbmrkXSorgzKghc=; b=WnVe6zDx1VytZEC1KdgHGi33LLomM72YwO0F0QE6ydmCbCM2QGtmwd30B79T9xzp32 T3YCwnKP6Saf1+hD7RD5+gKMpiq83IPZM1PFahhk6/OSPTXvqDrzlSPi945uTcUn613i /l9aadzoK3wgATrozKDz0+Zr8UOiEDd4l/ThCotCtd+r9lHMtP/+zNDk2x08k3L2QTvZ uGkcyqeAtMIgfK1WUwVuQBjafP1spA4wmwCMVrEkmnQo9rUQt+VrtmPR8tVqvAKMQPRA fMJfEOPmNJ/o7jGcZEJ7NdLlI4DBC4hU5YZl1dJCAtsv1/3iwXnoRmyFJePQord3T5jv 66dw== X-Google-DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/relaxed; d=1e100.net; s=20161025; h=x-gm-message-state:from:to:cc:subject:date:message-id:in-reply-to :references:mime-version:content-transfer-encoding; bh=SWG+jXUDXHU/v2lV0aDlLD0IncOBQbmrkXSorgzKghc=; b=R0E0hrLeLVWUvcXNmdfeQgjd0PT7l977uP1OpZRx3/YbYK5qbL+ZbFjYBbQWW8OzDh jxFgSRPuEz8DYzrXYMsQtl0WbNx7xlXmkW7gWpSVusZn/BdpQErug5BrHnekK/fOUJTh exauuijl2aUxC/DiZFJJv+pTdEC3ZMeLjc3Fum9T9iPuN0iYEjKagiOqWOSGB+KlyZV3 JHELPz3gKaJXLghHmsobxki6BucVrsLoO2vfrD0YOxjUxm1PRZZSJddvGpSrH+b55m2U QHP6iVwPA3/QsPpY86W2vvs06mP5VqYEppScct0399fLL2fg8Tyn78Gezoif0jxuqVIH pCiQ== X-Gm-Message-State: AOAM5301zZtnaUBOlkVCQci9S9RCtKzHnUSd0tslB84EVSrgST8CnMd0 4z1qZCx0hQshg36VlF5XazyPJSvvyIU= X-Google-Smtp-Source: ABdhPJwHLc6U6zg6+RNx5qZUWpFO74WZRiRrZpAc4JZ42RoXejRtEx6laQxaiN7Q4jIVscoCryi9Tw== X-Received: by 2002:a5d:6806:: with SMTP id w6mr3212412wru.395.1599847736705; Fri, 11 Sep 2020 11:08:56 -0700 (PDT) Received: from pfiuh02.univ-paris-diderot.fr ([193.48.40.241]) by smtp.gmail.com with ESMTPSA id y1sm5914005wmd.22.2020.09.11.11.08.56 (version=TLS1_3 cipher=TLS_AES_256_GCM_SHA384 bits=256/256); Fri, 11 Sep 2020 11:08:56 -0700 (PDT) From: zimoun Date: Fri, 11 Sep 2020 20:08:41 +0200 Message-Id: <20200911180849.12582-4-zimon.toutoune@gmail.com> X-Mailer: git-send-email 2.28.0 In-Reply-To: <20200911180849.12582-1-zimon.toutoune@gmail.com> References: <20200911180849.12582-1-zimon.toutoune@gmail.com> MIME-Version: 1.0 Content-Transfer-Encoding: 8bit X-Spam-Score: 0.0 (/) X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list X-Spam-Score: -1.0 (-) X-BeenThere: guix-patches@gnu.org List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: guix-patches-bounces+larch=yhetil.org@gnu.org Sender: "Guix-patches" X-Scanner: scn0 Authentication-Results: aspmx2.migadu.com; dkim=fail (rsa verify failed) header.d=gmail.com header.s=20161025 header.b=WnVe6zDx; dmarc=fail reason="SPF not aligned (relaxed)" header.from=gmail.com (policy=none); spf=pass (aspmx2.migadu.com: domain of guix-patches-bounces@gnu.org designates 209.51.188.17 as permitted sender) smtp.mailfrom=guix-patches-bounces@gnu.org X-Spam-Score: 4.09 X-TUID: Db9wjnz+1vRf * gnu/packages/graph.scm (r-igraph): Move from here... * gnu/packages/cran.scm (r-igraph): ...to here. --- gnu/packages/cran.scm | 33 +++++++++++++++++++++++++++++++++ gnu/packages/graph.scm | 32 -------------------------------- 2 files changed, 33 insertions(+), 32 deletions(-) diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm index d539dc34a3..717bd36d4d 100644 --- a/gnu/packages/cran.scm +++ b/gnu/packages/cran.scm @@ -91,6 +91,7 @@ #:use-module (gnu packages tcl) #:use-module (gnu packages tls) #:use-module (gnu packages web) + #:use-module (gnu packages xml) #:use-module (gnu packages xorg)) (define-public r-rticles @@ -23668,3 +23669,35 @@ parametrization, including creation and visualization of diffusion maps, clustering with diffusion K-means and regression using the adaptive regression model.") (license license:gpl2))) + +(define-public r-igraph + (package + (name "r-igraph") + (version "1.2.5") + (source + (origin + (method url-fetch) + (uri (cran-uri "igraph" version)) + (sha256 + (base32 + "126z1ygbmi3g7hk97snf22rnx680dyi30idssm5zacba5rdngp8c")))) + (build-system r-build-system) + (native-inputs + `(("gfortran" ,gfortran))) + (inputs + `(("gmp" ,gmp) + ("glpk" ,glpk) + ("libxml2" ,libxml2) + ("zlib" ,zlib))) + (propagated-inputs + `(("r-magrittr" ,r-magrittr) + ("r-matrix" ,r-matrix) + ("r-pkgconfig" ,r-pkgconfig))) + (home-page "https://igraph.org") + (synopsis "Network analysis and visualization") + (description + "This package provides routines for simple graphs and network analysis. +It can handle large graphs very well and provides functions for generating +random and regular graphs, graph visualization, centrality methods and much +more.") + (license license:gpl2+))) diff --git a/gnu/packages/graph.scm b/gnu/packages/graph.scm index 54ced01f6c..a307fee808 100644 --- a/gnu/packages/graph.scm +++ b/gnu/packages/graph.scm @@ -121,38 +121,6 @@ more.") (home-page "https://pypi.org/project/python-igraph/") (synopsis "Python bindings for the igraph network analysis library"))) -(define-public r-igraph - (package - (name "r-igraph") - (version "1.2.5") - (source - (origin - (method url-fetch) - (uri (cran-uri "igraph" version)) - (sha256 - (base32 - "126z1ygbmi3g7hk97snf22rnx680dyi30idssm5zacba5rdngp8c")))) - (build-system r-build-system) - (native-inputs - `(("gfortran" ,gfortran))) - (inputs - `(("gmp" ,gmp) - ("glpk" ,glpk) - ("libxml2" ,libxml2) - ("zlib" ,zlib))) - (propagated-inputs - `(("r-magrittr" ,r-magrittr) - ("r-matrix" ,r-matrix) - ("r-pkgconfig" ,r-pkgconfig))) - (home-page "https://igraph.org") - (synopsis "Network analysis and visualization") - (description - "This package provides routines for simple graphs and network analysis. -It can handle large graphs very well and provides functions for generating -random and regular graphs, graph visualization, centrality methods and much -more.") - (license license:gpl2+))) - (define-public r-rgraphviz (package (name "r-rgraphviz") -- 2.28.0