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[59.149.170.72]) by smtp.gmail.com with ESMTPSA id g9sm30259812pfm.151.2020.06.28.02.29.59 (version=TLS1_3 cipher=TLS_AES_256_GCM_SHA384 bits=256/256); Sun, 28 Jun 2020 02:30:00 -0700 (PDT) From: Peter Lo Date: Sun, 28 Jun 2020 17:29:44 +0800 Message-Id: <20200628092944.19939-6-peterloleungyau@gmail.com> X-Mailer: git-send-email 2.17.1 In-Reply-To: <20200628092944.19939-1-peterloleungyau@gmail.com> References: <20200628092944.19939-1-peterloleungyau@gmail.com> X-Spam-Score: 0.0 (/) X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list X-Spam-Score: -1.0 (-) X-BeenThere: guix-patches@gnu.org List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: guix-patches-bounces+larch=yhetil.org@gnu.org Sender: "Guix-patches" X-Scanner: scn0 Authentication-Results: aspmx1.migadu.com; dkim=fail (rsa verify failed) header.d=gmail.com header.s=20161025 header.b=t90K/+FI; dmarc=fail reason="SPF not aligned (relaxed)" header.from=gmail.com (policy=none); spf=pass (aspmx1.migadu.com: domain of guix-patches-bounces@gnu.org designates 209.51.188.17 as permitted sender) smtp.mailfrom=guix-patches-bounces@gnu.org X-Spam-Score: 1.09 X-TUID: NK1PPB+hyRj1 * gnu/packages/cran.scm (r-survminer): New variable. --- gnu/packages/cran.scm | 41 +++++++++++++++++++++++++++++++++++++++++ 1 file changed, 41 insertions(+) diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm index f51e69689b..4b28f25954 100644 --- a/gnu/packages/cran.scm +++ b/gnu/packages/cran.scm @@ -22454,3 +22454,44 @@ implementation of the Shift-Algorithm by Streitberg & Roehmel.") "Maximally selected rank statistics with several p-value approximations.") (license license:gpl2+))) + +(define-public r-survminer + (package + (name "r-survminer") + (version "0.4.7") + (source + (origin + (method url-fetch) + (uri (cran-uri "survminer" version)) + (sha256 + (base32 + "1pdj3gs4aii8gn8wf4smbwmjymbzwkjwr3kxf90dxyy6i66mqq3v")))) + (properties `((upstream-name . "survminer"))) + (build-system r-build-system) + (propagated-inputs + `(("r-broom" ,r-broom) + ("r-dplyr" ,r-dplyr) + ("r-ggplot2" ,r-ggplot2) + ("r-ggpubr" ,r-ggpubr) + ("r-gridextra" ,r-gridextra) + ("r-magrittr" ,r-magrittr) + ("r-maxstat" ,r-maxstat) + ("r-purrr" ,r-purrr) + ("r-rlang" ,r-rlang) + ("r-scales" ,r-scales) + ("r-survival" ,r-survival) + ("r-survmisc" ,r-survmisc) + ("r-tibble" ,r-tibble) + ("r-tidyr" ,r-tidyr))) + (native-inputs `(("r-knitr" ,r-knitr))) + (home-page + "http://www.sthda.com/english/rpkgs/survminer/") + (synopsis + "Drawing Survival Curves using 'ggplot2'") + (description + "Contains the function @code{ggsurvplot()} for drawing easily +beautiful and 'ready-to-publish' survival curves with the 'number at +risk' table and 'censoring count plot'. Other functions are also +available to plot adjusted curves for `Cox` model and to visually +examine 'Cox' model assumptions.") + (license license:gpl2))) -- 2.17.1