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[59.149.170.72]) by smtp.gmail.com with ESMTPSA id m92sm13747775pje.13.2020.06.28.00.44.26 (version=TLS1_3 cipher=TLS_AES_256_GCM_SHA384 bits=256/256); Sun, 28 Jun 2020 00:44:27 -0700 (PDT) From: Peter Lo Date: Sun, 28 Jun 2020 15:44:14 +0800 Message-Id: <20200628074414.6986-2-peterloleungyau@gmail.com> X-Mailer: git-send-email 2.17.1 In-Reply-To: <20200628074414.6986-1-peterloleungyau@gmail.com> References: <20200628074414.6986-1-peterloleungyau@gmail.com> X-Spam-Score: 0.0 (/) X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list X-Spam-Score: -1.0 (-) X-BeenThere: guix-patches@gnu.org List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: guix-patches-bounces+larch=yhetil.org@gnu.org Sender: "Guix-patches" X-Scanner: scn0 Authentication-Results: aspmx1.migadu.com; dkim=fail (rsa verify failed) header.d=gmail.com header.s=20161025 header.b=b9GXRt76; dmarc=fail reason="SPF not aligned (relaxed)" header.from=gmail.com (policy=none); spf=pass (aspmx1.migadu.com: domain of guix-patches-bounces@gnu.org designates 209.51.188.17 as permitted sender) smtp.mailfrom=guix-patches-bounces@gnu.org X-Spam-Score: 1.09 X-TUID: cIA5ZCHEDWHL * gnu/packages/cran.scm (r-flexsurv): New variable. --- gnu/packages/cran.scm | 37 +++++++++++++++++++++++++++++++++++++ 1 file changed, 37 insertions(+) diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm index b6cc9b48c3..0ddd0d29d2 100644 --- a/gnu/packages/cran.scm +++ b/gnu/packages/cran.scm @@ -22348,3 +22348,40 @@ counting and recursive k-means partitioning.") (description "Produces a smooth estimate of the hazard function for censored data.") (license (list license:gpl2+ license:gpl3+)))) + +(define-public r-flexsurv + (package + (name "r-flexsurv") + (version "1.1.1") + (source + (origin + (method url-fetch) + (uri (cran-uri "flexsurv" version)) + (sha256 + (base32 + "0x7p1rv51pplfyyzcg63ssb8z56mig7y0363hkr0219w3cvyq9nr")))) + (properties `((upstream-name . "flexsurv"))) + (build-system r-build-system) + (propagated-inputs + `(("r-desolve" ,r-desolve) + ("r-mstate" ,r-mstate) + ("r-muhaz" ,r-muhaz) + ("r-mvtnorm" ,r-mvtnorm) + ("r-quadprog" ,r-quadprog) + ("r-rcpp" ,r-rcpp) + ("r-survival" ,r-survival) + ("r-tibble" ,r-tibble) + ("r-tidyr" ,r-tidyr))) + (native-inputs `(("r-knitr" ,r-knitr))) + (home-page + "https://github.com/chjackson/flexsurv-dev") + (synopsis + "Flexible Parametric Survival and Multi-State Models") + (description + "Flexible parametric models for time-to-event data, including +the Royston-Parmar spline model, generalized gamma and generalized F +distributions. Any user-defined parametric distribution can be +fitted, given at least an R function defining the probability density +or hazard. There are also tools for fitting and predicting from fully +parametric multi-state models.") + (license license:gpl2+))) -- 2.17.1