unofficial mirror of guix-patches@gnu.org 
 help / color / mirror / code / Atom feed
From: "Mădălin Ionel Patrașcu" <madalinionel.patrascu@mdc-berlin.de>
To: 38676@debbugs.gnu.org
Cc: "Mădălin Ionel Patrașcu" <madalinionel.patrascu@mdc-berlin.de>
Subject: [bug#38676] [PATCH 2/2] gnu: fastx-toolkit: Build with GCC 6
Date: Thu, 19 Dec 2019 20:24:09 +0100	[thread overview]
Message-ID: <20191219192409.16812-2-madalinionel.patrascu@mdc-berlin.de> (raw)
In-Reply-To: <20191219192409.16812-1-madalinionel.patrascu@mdc-berlin.de>

* gnu/packages/bioinformatics.scm (fastx-toolkit)[native-inputs]: Add gcc-6.
---
 gnu/packages/bioinformatics.scm | 3 ++-
 1 file changed, 2 insertions(+), 1 deletion(-)

diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index 528b603476..27ff70b1fb 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -2995,7 +2995,8 @@ reasonable amount of time and memory.  For large alignments, FastTree is
     (inputs
      `(("libgtextutils" ,libgtextutils)))
     (native-inputs
-     `(("pkg-config" ,pkg-config)))
+     `(("gcc" ,gcc-6) ;; doesn't build with later versions
+       ("pkg-config" ,pkg-config)))
     (home-page "http://hannonlab.cshl.edu/fastx_toolkit/")
     (synopsis "Tools for FASTA/FASTQ file preprocessing")
     (description
-- 
2.24.1

  reply	other threads:[~2019-12-19 19:25 UTC|newest]

Thread overview: 4+ messages / expand[flat|nested]  mbox.gz  Atom feed  top
2019-12-19 19:20 [bug#38676] (no subject) mpatras
2019-12-19 19:24 ` [bug#38676] [PATCH 1/2] gnu: libgtextutils: Build with GCC 5 Mădălin Ionel Patrașcu
2019-12-19 19:24   ` Mădălin Ionel Patrașcu [this message]
2019-12-21 22:53   ` bug#38676: " Ludovic Courtès

Reply instructions:

You may reply publicly to this message via plain-text email
using any one of the following methods:

* Save the following mbox file, import it into your mail client,
  and reply-to-all from there: mbox

  Avoid top-posting and favor interleaved quoting:
  https://en.wikipedia.org/wiki/Posting_style#Interleaved_style

  List information: https://guix.gnu.org/

* Reply using the --to, --cc, and --in-reply-to
  switches of git-send-email(1):

  git send-email \
    --in-reply-to=20191219192409.16812-2-madalinionel.patrascu@mdc-berlin.de \
    --to=madalinionel.patrascu@mdc-berlin.de \
    --cc=38676@debbugs.gnu.org \
    /path/to/YOUR_REPLY

  https://kernel.org/pub/software/scm/git/docs/git-send-email.html

* If your mail client supports setting the In-Reply-To header
  via mailto: links, try the mailto: link
Be sure your reply has a Subject: header at the top and a blank line before the message body. 
Code repositories for project(s) associated with this public inbox

	https://git.savannah.gnu.org/cgit/guix.git

This is a public inbox, see mirroring instructions
for how to clone and mirror all data and code used for this inbox;
as well as URLs for read-only IMAP folder(s) and NNTP newsgroup(s).