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From: zimoun <zimon.toutoune@gmail.com>
To: 36790@debbugs.gnu.org
Subject: [bug#36790] [PATCH 01/11] gnu: Add r-umap.
Date: Wed, 24 Jul 2019 20:21:54 +0200	[thread overview]
Message-ID: <20190724182204.6818-2-zimon.toutoune@gmail.com> (raw)
In-Reply-To: <20190724182204.6818-1-zimon.toutoune@gmail.com>

* gnu/packages/cran.scm (r-umap): New variable.
---
 gnu/packages/cran.scm | 27 +++++++++++++++++++++++++++
 1 file changed, 27 insertions(+)

diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm
index 3f0d819df7..768a7d09c5 100644
--- a/gnu/packages/cran.scm
+++ b/gnu/packages/cran.scm
@@ -14530,3 +14530,30 @@ including regression, classification and ranking.  The package is made to be
 extensible, so that users are also allowed to define their own objectives
 easily.")
     (license license:asl2.0)))
+
+(define-public r-umap
+  (package
+    (name "r-umap")
+    (version "0.2.2.0")
+    (source
+      (origin
+        (method url-fetch)
+        (uri (cran-uri "umap" version))
+        (sha256
+          (base32
+            "1s82w9gy1387h7cprjfbhp49l89zbmn3gc9s0wzqb1s73nza9n31"))))
+    (build-system r-build-system)
+    (propagated-inputs
+      `(("r-rcpp" ,r-rcpp)
+        ("r-reticulate" ,r-reticulate)
+        ("r-rspectra" ,r-rspectra)))
+    (home-page "https://github.com/tkonopka/umap")
+    (synopsis
+      "Uniform Manifold Approximation and Projection")
+    (description
+      "Uniform manifold approximation and projection is a technique for
+dimension reduction.  The algorithm was described by McInnes and Healy (2018)
+in <arXiv:1802.03426>.  This package provides an interface to the UMAP
+algorithm in R, including a translation of the original algorithm into R with
+minimal dependencies.")
+    (license license:expat)))
-- 
2.21.0

  reply	other threads:[~2019-07-24 18:23 UTC|newest]

Thread overview: 18+ messages / expand[flat|nested]  mbox.gz  Atom feed  top
2019-07-24 18:21 [bug#36789] [PATCH 00/11] Add r packages to process flow cytometry data zimoun
2019-07-24 18:21 ` zimoun [this message]
2019-07-24 19:17   ` [bug#36790] Merge 36789 36790 zimoun
2019-07-24 18:21 ` [bug#36791] [PATCH 02/11] gnu: Add r-kableextra zimoun
2019-07-24 18:21 ` [bug#36792] [PATCH 03/11] gnu: Add r-all zimoun
2019-07-24 18:21 ` [bug#36793] [PATCH 04/11] gnu: Add r-flowcore zimoun
2019-07-24 18:21 ` [bug#36794] [PATCH 05/11] gnu: Add r-flowutils zimoun
2019-07-24 18:21 ` [bug#36795] [PATCH 06/11] gnu: Add r-consensusclusterplus zimoun
2019-07-24 18:22 ` [bug#36796] [PATCH 07/11] gnu: Add r-flowmeans zimoun
2019-07-24 18:22 ` [bug#36797] [PATCH 08/11] gnu: Add r-flowpeaks zimoun
2019-07-24 20:51   ` Ricardo Wurmus
2020-02-21 17:07   ` bug#36797: patches merged zimoun
2019-07-24 18:22 ` [bug#36798] [PATCH 09/11] gnu: Add r-flowsom zimoun
2019-07-24 18:22 ` [bug#36799] [PATCH 10/11] gnu: Add r-mixomics zimoun
2019-07-24 18:22 ` [bug#36800] [PATCH 11/11] gnu: Add r-depecher zimoun
2019-07-24 20:49   ` Ricardo Wurmus
2019-07-25  9:54     ` zimoun
2019-07-25 12:45       ` Ricardo Wurmus

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