From: Ricardo Wurmus <rekado@elephly.net>
To: 28986@debbugs.gnu.org
Cc: Ricardo Wurmus <rekado@elephly.net>
Subject: [bug#28986] [PATCH] gnu: Add r-tgstat.
Date: Sun, 22 Oct 2017 13:56:07 +0200 [thread overview]
Message-ID: <20171022115607.622-1-rekado@elephly.net> (raw)
* gnu/packages/statistics.scm (r-tgstat): New variable.
---
gnu/packages/statistics.scm | 35 +++++++++++++++++++++++++++++++++++
1 file changed, 35 insertions(+)
diff --git a/gnu/packages/statistics.scm b/gnu/packages/statistics.scm
index b3ebd5abb..6c8f7b5fa 100644
--- a/gnu/packages/statistics.scm
+++ b/gnu/packages/statistics.scm
@@ -27,6 +27,7 @@
#:use-module ((guix licenses) #:prefix license:)
#:use-module (guix packages)
#:use-module (guix download)
+ #:use-module (guix hg-download)
#:use-module (guix utils)
#:use-module (guix build-system gnu)
#:use-module (guix build-system r)
@@ -5442,3 +5443,37 @@ the least concave majorant (LCM), for the half-normal and correlation
distributions, and for computing empirical higher criticism (HC) scores and
the corresponding decision threshold.")
(license license:gpl3+)))
+
+(define-public r-tgstat
+ (let ((changeset "4f8e60c03598f49aff6f5beeab40f2b995377e9f")
+ (revision "1"))
+ (package
+ (name "r-tgstat")
+ (version (string-append "1.0.2-" revision "." (string-take changeset 7)))
+ (source
+ (origin
+ (method hg-fetch)
+ (uri (hg-reference
+ (url "https://bitbucket.org/tanaylab/tgstat")
+ (changeset changeset)))
+ (sha256
+ (base32
+ "0ilkkyximy77zbncm91kdfqbxf0qyndg16pd3q3p6a3xc9qcmxvn"))))
+ (build-system r-build-system)
+ (arguments
+ `(#:phases
+ (modify-phases %standard-phases
+ (add-after 'unpack 'fix-isnan
+ (lambda _
+ (substitute* "src/tgstat.h"
+ (("#define isnan ::isnan")
+ "#define isnan std::isnan"))
+ #t)))))
+ (propagated-inputs
+ `(("r-rcpp" ,r-rcpp)))
+ (home-page "https://bitbucket.org/tanaylab/tgstat/")
+ (synopsis "Tanay's group statistical utilities")
+ (description
+ "The goal of tgstat is to provide fast and efficient statistical
+tools.")
+ (license license:gpl2))))
--
2.14.1
next reply other threads:[~2017-10-25 3:48 UTC|newest]
Thread overview: 4+ messages / expand[flat|nested] mbox.gz Atom feed top
2017-10-22 11:56 Ricardo Wurmus [this message]
2017-10-26 5:13 ` [bug#28986] [PATCH] gnu: Add r-tgstat Ludovic Courtès
2017-10-26 7:56 ` Ricardo Wurmus
2017-10-30 11:12 ` bug#28986: " Ricardo Wurmus
Reply instructions:
You may reply publicly to this message via plain-text email
using any one of the following methods:
* Save the following mbox file, import it into your mail client,
and reply-to-all from there: mbox
Avoid top-posting and favor interleaved quoting:
https://en.wikipedia.org/wiki/Posting_style#Interleaved_style
List information: https://guix.gnu.org/
* Reply using the --to, --cc, and --in-reply-to
switches of git-send-email(1):
git send-email \
--in-reply-to=20171022115607.622-1-rekado@elephly.net \
--to=rekado@elephly.net \
--cc=28986@debbugs.gnu.org \
/path/to/YOUR_REPLY
https://kernel.org/pub/software/scm/git/docs/git-send-email.html
* If your mail client supports setting the In-Reply-To header
via mailto: links, try the mailto: link
Be sure your reply has a Subject: header at the top and a blank line
before the message body.
Code repositories for project(s) associated with this public inbox
https://git.savannah.gnu.org/cgit/guix.git
This is a public inbox, see mirroring instructions
for how to clone and mirror all data and code used for this inbox;
as well as URLs for read-only IMAP folder(s) and NNTP newsgroup(s).