From: Paul Garlick <pgarlick@tourbillion-technology.com>
To: 33059@debbugs.gnu.org, "Efraim Flashner" <efraim@flashner.co.il>,
"Eric Bavier" <ericbavier@centurylink.net>,
"Ludovic Courtès" <ludo@gnu.org>
Cc: Paul Garlick <pgarlick@tourbillion-technology.com>
Subject: [bug#33059] [PATCH v2 1/9] gnu: Add python-mpi4py.
Date: Mon, 12 Nov 2018 16:00:33 +0000 [thread overview]
Message-ID: <1542038441-5738-2-git-send-email-pgarlick@tourbillion-technology.com> (raw)
In-Reply-To: <1542038441-5738-1-git-send-email-pgarlick@tourbillion-technology.com>
* gnu/packages/mpi.scm (python-mpi4py): New variable.
---
gnu/packages/mpi.scm | 42 ++++++++++++++++++++++++++++++++++++++++++
1 file changed, 42 insertions(+)
diff --git a/gnu/packages/mpi.scm b/gnu/packages/mpi.scm
index fc8aade..f08a7f5 100644
--- a/gnu/packages/mpi.scm
+++ b/gnu/packages/mpi.scm
@@ -6,6 +6,7 @@
;;; Copyright © 2017 Dave Love <fx@gnu.org>
;;; Copyright © 2017 Efraim Flashner <efraim@flashner.co.il>
;;; Copyright © 2018 Tobias Geerinckx-Rice <me@tobias.gr>
+;;; Copyright © 2018 Paul Garlick <pgarlick@tourbillion-technology.com>
;;;
;;; This file is part of GNU Guix.
;;;
@@ -29,6 +30,7 @@
#:use-module (guix download)
#:use-module (guix utils)
#:use-module (guix build-system gnu)
+ #:use-module (guix build-system python)
#:use-module (gnu packages)
#:use-module (gnu packages gcc)
#:use-module (gnu packages linux)
@@ -263,3 +265,43 @@ only provides @code{MPI_THREAD_FUNNELED}.")))
;; in the build environment than the package wants while testing.
(setenv "OMPI_MCA_rmaps_base_oversubscribe" "yes")
#t))
+
+(define-public python-mpi4py
+ (package
+ (name "python-mpi4py")
+ (version "3.0.0")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (pypi-uri "mpi4py" version))
+ (sha256
+ (base32
+ "1mzgd26dfv4vwbci8gq77ss9f0x26i9aqzq9b9vs9ndxhlnv0mxl"))))
+ (build-system python-build-system)
+ (arguments
+ `(#:phases
+ (modify-phases %standard-phases
+ (add-after 'build 'mpi-setup
+ ,%openmpi-setup)
+ (add-before 'check 'pre-check
+ (lambda _
+ ;; Skip BaseTestSpawn class (causes error 'ompi_dpm_dyn_init()
+ ;; failed --> Returned "Unreachable"' in chroot environment).
+ (substitute* "test/test_spawn.py"
+ (("unittest.skipMPI\\('openmpi\\(<3.0.0\\)'\\)")
+ "unittest.skipMPI('openmpi')"))
+ #t)))))
+ (inputs
+ `(("openmpi" ,openmpi)))
+ (home-page "https://bitbucket.org/mpi4py/mpi4py/")
+ (synopsis "Python bindings for the Message Passing Interface standard")
+ (description "MPI for Python (mpi4py) provides bindings of the Message
+Passing Interface (MPI) standard for the Python programming language, allowing
+any Python program to exploit multiple processors.
+
+mpi4py is constructed on top of the MPI-1/MPI-2 specification and provides an
+object oriented interface which closely follows MPI-2 C++ bindings. It
+supports point-to-point and collective communications of any picklable Python
+object as well as optimized communications of Python objects (such as NumPy
+arrays) that expose a buffer interface.")
+ (license bsd-3)))
--
1.8.3.1
next prev parent reply other threads:[~2018-11-12 16:04 UTC|newest]
Thread overview: 37+ messages / expand[flat|nested] mbox.gz Atom feed top
2018-10-16 9:17 [bug#33059] [PATCH 00/10] Add the FEniCS Project Paul Garlick
2018-10-16 9:31 ` [bug#33059] [PATCH 01/10] gnu: Add python-mpi4py Paul Garlick
2018-10-16 9:31 ` [bug#33059] [PATCH 02/10] gnu: Add python-petsc4py Paul Garlick
2018-10-24 21:45 ` Ludovic Courtès
2018-10-16 9:31 ` [bug#33059] [PATCH 03/10] gnu: Add python-slepc4py Paul Garlick
2018-10-24 21:46 ` Ludovic Courtès
2018-10-16 9:31 ` [bug#33059] [PATCH 04/10] gnu: Add python-fenics-dijitso Paul Garlick
2018-10-16 18:30 ` Efraim Flashner
2018-10-17 9:09 ` Paul Garlick
2018-10-24 21:48 ` Ludovic Courtès
2018-10-16 9:31 ` [bug#33059] [PATCH 05/10] gnu: Add python-fenics-ufl Paul Garlick
2018-10-24 21:52 ` Ludovic Courtès
2018-10-16 9:31 ` [bug#33059] [PATCH 06/10] gnu: Add python-fenics-fiat Paul Garlick
2018-10-24 21:53 ` Ludovic Courtès
2018-10-16 9:31 ` [bug#33059] [PATCH 07/10] gnu: Add python-fenics-ffc Paul Garlick
2018-10-24 21:55 ` Ludovic Courtès
2018-10-16 9:31 ` [bug#33059] [PATCH 08/10] gnu: Add fenics-dolfin Paul Garlick
2018-10-24 22:12 ` Ludovic Courtès
2018-10-16 9:31 ` [bug#33059] [PATCH 09/10] gnu: Add python-fenics-dolfin Paul Garlick
2018-10-24 22:15 ` Ludovic Courtès
2018-10-16 9:31 ` [bug#33059] [PATCH 10/10] gnu: Add fenics Paul Garlick
2018-10-24 22:17 ` Ludovic Courtès
2018-11-12 16:00 ` [bug#33059] [PATCH v2 0/9] Add the FEniCS Project, v2 patches Paul Garlick
2018-11-12 16:00 ` Paul Garlick [this message]
2018-11-12 16:00 ` [bug#33059] [PATCH v2 2/9] gnu: Add python-petsc4py Paul Garlick
2018-11-12 16:00 ` [bug#33059] [PATCH v2 3/9] gnu: Add python-slepc4py Paul Garlick
2018-11-12 16:00 ` [bug#33059] [PATCH v2 4/9] gnu: Add python-fenics-dijitso Paul Garlick
2018-11-12 16:00 ` [bug#33059] [PATCH v2 5/9] gnu: Add python-fenics-ufl Paul Garlick
2018-11-12 16:00 ` [bug#33059] [PATCH v2 6/9] gnu: Add python-fenics-fiat Paul Garlick
2018-11-14 21:11 ` Ludovic Courtès
2018-11-12 16:00 ` [bug#33059] [PATCH v2 7/9] gnu: Add python-fenics-ffc Paul Garlick
2018-11-12 16:00 ` [bug#33059] [PATCH v2 8/9] gnu: Add fenics-dolfin Paul Garlick
2018-11-12 16:00 ` [bug#33059] [PATCH v2 9/9] gnu: Add fenics Paul Garlick
2018-11-14 20:38 ` bug#33059: [PATCH v2 0/9] Add the FEniCS Project, v2 patches Ludovic Courtès
2018-10-19 16:03 ` [bug#33059] [PATCH 01/10] gnu: Add python-mpi4py Eric Bavier
2018-10-22 8:51 ` Paul Garlick
2018-10-24 21:44 ` Ludovic Courtès
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