From: Ricardo Wurmus <ricardo.wurmus@mdc-berlin.de>
To: Leo Famulari <leo@famulari.name>
Cc: guix-devel <guix-devel@gnu.org>
Subject: Re: [PATCH] Update deeptools.
Date: Thu, 3 Mar 2016 13:32:39 +0100 [thread overview]
Message-ID: <idjziufyc60.fsf@bimsb-sys02.mdc-berlin.net> (raw)
In-Reply-To: <20160303015005.GA28589@jasmine>
Leo Famulari <leo@famulari.name> writes:
> On Mon, Feb 29, 2016 at 02:47:04PM +0100, Ricardo Wurmus wrote:
>> Hi Guix,
>>
>> the goal of this series of patches is to update deeptools.
>>
>> First I moved the “*-pysam” packages from python.scm to
>> bioinformatics.scm, then updated them. Then added “pybigwig”, cleaned
>> up “deeptools” (used “propagated-inputs” for no good reason), and
>> finally updated the package.
>
> All look good, although can you say if pysam needs setuptools at
> run-time? Or does it make sense to change it to a native-input?
I just rebuild pysam with setuptools and cython moved to native-inputs
and it seems all fine. I’ll push that commit too. Thanks for the hint
and the review!
~~ Ricardo
prev parent reply other threads:[~2016-03-03 12:32 UTC|newest]
Thread overview: 3+ messages / expand[flat|nested] mbox.gz Atom feed top
2016-02-29 13:47 [PATCH] Update deeptools Ricardo Wurmus
2016-03-03 1:50 ` Leo Famulari
2016-03-03 12:32 ` Ricardo Wurmus [this message]
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