From mboxrd@z Thu Jan 1 00:00:00 1970 From: Ricardo Wurmus Subject: [PATCH] bless: Remove bundled sources for sparsehash. Date: Mon, 14 Mar 2016 14:29:35 +0100 Message-ID: Mime-Version: 1.0 Content-Type: text/x-patch Return-path: Received: from eggs.gnu.org ([2001:4830:134:3::10]:41516) by lists.gnu.org with esmtp (Exim 4.71) (envelope-from ) id 1afSZB-0003ih-Ex for guix-devel@gnu.org; Mon, 14 Mar 2016 09:29:50 -0400 Received: from Debian-exim by eggs.gnu.org with spam-scanned (Exim 4.71) (envelope-from ) id 1afSZ5-0000yI-9n for guix-devel@gnu.org; Mon, 14 Mar 2016 09:29:49 -0400 Received: from venus.bbbm.mdc-berlin.de ([141.80.25.30]:57438) by eggs.gnu.org with esmtp (Exim 4.71) (envelope-from ) id 1afSZ5-0000xQ-0w for guix-devel@gnu.org; Mon, 14 Mar 2016 09:29:43 -0400 Received: from localhost (localhost [127.0.0.1]) by venus.bbbm.mdc-berlin.de (Postfix) with ESMTP id 54986380890 for ; Mon, 14 Mar 2016 14:29:41 +0100 (CET) Received: from venus.bbbm.mdc-berlin.de ([127.0.0.1]) by localhost (venus.bbbm.mdc-berlin.de [127.0.0.1]) (amavisd-new, port 10024) with ESMTP id lsKTyrnO9Mmd for ; Mon, 14 Mar 2016 14:29:35 +0100 (CET) Received: from HTCATWO.mdc-berlin.net (puck.citx.mdc-berlin.de [141.80.36.101]) (using TLSv1 with cipher ECDHE-RSA-AES256-SHA (256/256 bits)) (No client certificate requested) by venus.bbbm.mdc-berlin.de (Postfix) with ESMTPS for ; Mon, 14 Mar 2016 14:29:35 +0100 (CET) Content-Disposition: inline; filename="0001-gnu-bless-Remove-bundled-sources-for-sparsehash.patch" List-Id: "Development of GNU Guix and the GNU System distribution." List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: guix-devel-bounces+gcggd-guix-devel=m.gmane.org@gnu.org Sender: guix-devel-bounces+gcggd-guix-devel=m.gmane.org@gnu.org To: guix-devel >From df547eefe4cf2e18f8bccf62a4adc3bd5f3e2258 Mon Sep 17 00:00:00 2001 From: Ricardo Wurmus Date: Mon, 14 Mar 2016 14:16:55 +0100 Subject: [PATCH] gnu: bless: Remove bundled sources for sparsehash. * gnu/packages/bioinformatics.scm (bless)[source]: Delete "google-sparsehash" sources. [inputs]: Add "sparsehash". --- gnu/packages/bioinformatics.scm | 6 ++++-- 1 file changed, 4 insertions(+), 2 deletions(-) diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm index 5dedf10..5f3271d 100644 --- a/gnu/packages/bioinformatics.scm +++ b/gnu/packages/bioinformatics.scm @@ -579,10 +579,11 @@ confidence to have in an alignment.") (snippet `(begin ;; Remove bundled boost, pigz, zlib, and .git directory - ;; FIXME: also remove bundled sources for google-sparsehash, - ;; murmurhash3, kmc once packaged. + ;; FIXME: also remove bundled sources for murmurhash3 and + ;; kmc once packaged. (delete-file-recursively "boost") (delete-file-recursively "pigz") + (delete-file-recursively "google-sparsehash") (delete-file-recursively "zlib") (delete-file-recursively ".git") #t)))) @@ -632,6 +633,7 @@ confidence to have in an alignment.") (inputs `(("openmpi" ,openmpi) ("boost" ,boost) + ("sparsehash" ,sparsehash) ("pigz" ,pigz) ("zlib" ,zlib))) (supported-systems '("x86_64-linux")) -- 2.1.0