From mboxrd@z Thu Jan 1 00:00:00 1970 From: Ricardo Wurmus Subject: [PATCH] Fix build of vcftools on i686. Date: Mon, 4 May 2015 12:19:16 +0200 Message-ID: Mime-Version: 1.0 Content-Type: multipart/mixed; boundary="=-=-=" Return-path: Received: from eggs.gnu.org ([2001:4830:134:3::10]:50581) by lists.gnu.org with esmtp (Exim 4.71) (envelope-from ) id 1YpDTE-0005uh-TK for guix-devel@gnu.org; Mon, 04 May 2015 06:19:29 -0400 Received: from Debian-exim by eggs.gnu.org with spam-scanned (Exim 4.71) (envelope-from ) id 1YpDTB-0006m3-No for guix-devel@gnu.org; Mon, 04 May 2015 06:19:28 -0400 Received: from venus.bbbm.mdc-berlin.de ([141.80.25.30]:44933) by eggs.gnu.org with esmtp (Exim 4.71) (envelope-from ) id 1YpDTB-0006lp-Ev for guix-devel@gnu.org; Mon, 04 May 2015 06:19:25 -0400 Received: from localhost (localhost [127.0.0.1]) by venus.bbbm.mdc-berlin.de (Postfix) with ESMTP id DECAA3808D4 for ; Mon, 4 May 2015 12:19:23 +0200 (CEST) Received: from venus.bbbm.mdc-berlin.de ([127.0.0.1]) by localhost (venus.bbbm.mdc-berlin.de [127.0.0.1]) (amavisd-new, port 10024) with ESMTP id d_bO7ztuiLw3 for ; Mon, 4 May 2015 12:19:18 +0200 (CEST) Received: from HTCAONE.mdc-berlin.net (mab.citx.mdc-berlin.de [141.80.36.102]) by venus.bbbm.mdc-berlin.de (Postfix) with ESMTP for ; Mon, 4 May 2015 12:19:17 +0200 (CEST) List-Id: "Development of GNU Guix and the GNU System distribution." List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: guix-devel-bounces+gcggd-guix-devel=m.gmane.org@gnu.org Sender: guix-devel-bounces+gcggd-guix-devel=m.gmane.org@gnu.org To: guix-devel --=-=-= Content-Type: text/plain The attached patch fixes building vcftools on i686. I tested building it on a real i686 machine. --=-=-= Content-Type: text/x-patch Content-Disposition: inline; filename="0001-gnu-vcftools-Remove-m64-from-CFLAGS.patch" >From 4b8f52bcfa2a4284f7c7d98365e6f6058a709b34 Mon Sep 17 00:00:00 2001 From: Ricardo Wurmus Date: Mon, 4 May 2015 12:17:14 +0200 Subject: [PATCH] gnu: vcftools: Remove "-m64" from CFLAGS. * gnu/packages/bioinformatics.scm (vcftools): Explicitly set CFLAGS to remove "-m64" flag. --- gnu/packages/bioinformatics.scm | 1 + 1 file changed, 1 insertion(+) diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm index 7c2c439..fa7ff4c 100644 --- a/gnu/packages/bioinformatics.scm +++ b/gnu/packages/bioinformatics.scm @@ -1713,6 +1713,7 @@ in terms of new algorithms.") (arguments `(#:tests? #f ; no "check" target #:make-flags (list + "CFLAGS=-O2" ; override "-m64" flag (string-append "PREFIX=" (assoc-ref %outputs "out")) (string-append "MANDIR=" (assoc-ref %outputs "out") "/share/man/man1")) -- 2.1.0 --=-=-=--