From 08ebe755038bbb4111d4d68192af790b6cd7b1dc Mon Sep 17 00:00:00 2001 From: Ricardo Wurmus Date: Fri, 18 Dec 2015 12:07:18 +0100 Subject: [PATCH 2/6] gnu: Add S4Vectors. * gnu/packages/bioinformatics.scm (r-s4vectors): New variable. --- gnu/packages/bioinformatics.scm | 28 ++++++++++++++++++++++++++++ 1 file changed, 28 insertions(+) diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm index 7215fb9..83ba132 100644 --- a/gnu/packages/bioinformatics.scm +++ b/gnu/packages/bioinformatics.scm @@ -3345,6 +3345,34 @@ barplots or heatmaps.") packages.") (license license:artistic2.0))) +(define-public r-s4vectors + (package + (name "r-s4vectors") + (version "0.8.5") + (source (origin + (method url-fetch) + (uri (bioconductor-uri "S4Vectors" version)) + (sha256 + (base32 + "10f4jxwlwsiy7zhb3kgp6anid0d7wkvrrljl80r3nhx38yr24l5k")))) + (properties + `((upstream-name . "S4Vectors") + (r-repository . bioconductor))) + (build-system r-build-system) + (propagated-inputs + `(("r-biocgenerics" ,r-biocgenerics))) + (home-page "http://bioconductor.org/packages/S4Vectors") + (synopsis "S4 implementation of vectors and lists") + (description + "The S4Vectors package defines the @code{Vector} and @code{List} virtual +classes and a set of generic functions that extend the semantic of ordinary +vectors and lists in R. Package developers can easily implement vector-like +or list-like objects as concrete subclasses of @code{Vector} or @code{List}. +In addition, a few low-level concrete subclasses of general interest (e.g. +@code{DataFrame}, @code{Rle}, and @code{Hits}) are implemented in the +S4Vectors package itself.") + (license license:artistic2.0))) + (define-public r-qtl (package (name "r-qtl") -- 2.1.0