From mboxrd@z Thu Jan 1 00:00:00 1970 Return-Path: Received: from mp1 ([2001:41d0:2:4a6f::]) (using TLSv1.3 with cipher TLS_AES_256_GCM_SHA384 (256/256 bits)) by ms11 with LMTPS id 0Ck6JncEWl/hKAAA0tVLHw (envelope-from ) for ; Thu, 10 Sep 2020 10:48:23 +0000 Received: from aspmx1.migadu.com ([2001:41d0:2:4a6f::]) (using TLSv1.3 with cipher TLS_AES_256_GCM_SHA384 (256/256 bits)) by mp1 with LMTPS id uGYKIncEWl95awAAbx9fmQ (envelope-from ) for ; Thu, 10 Sep 2020 10:48:23 +0000 Received: from lists.gnu.org (lists.gnu.org [209.51.188.17]) (using TLSv1.2 with cipher ECDHE-RSA-AES256-GCM-SHA384 (256/256 bits)) (No client certificate requested) by aspmx1.migadu.com (Postfix) with ESMTPS id 53C4494062D for ; Thu, 10 Sep 2020 10:48:23 +0000 (UTC) Received: from localhost ([::1]:50044 helo=lists1p.gnu.org) by lists.gnu.org with esmtp (Exim 4.90_1) (envelope-from ) id 1kGK7q-00046s-5z for larch@yhetil.org; Thu, 10 Sep 2020 06:48:22 -0400 Received: from eggs.gnu.org ([2001:470:142:3::10]:54016) by lists.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from ) id 1kGK7e-0003zm-1U; Thu, 10 Sep 2020 06:48:10 -0400 Received: from fencepost.gnu.org ([2001:470:142:3::e]:55992) by eggs.gnu.org with esmtp (Exim 4.90_1) (envelope-from ) id 1kGK7d-00052t-Ln; Thu, 10 Sep 2020 06:48:09 -0400 Received: from [143.121.198.62] (port=47536 helo=cog147) by fencepost.gnu.org with esmtpsa (TLS1.2:RSA_AES_256_CBC_SHA1:256) (Exim 4.82) (envelope-from ) id 1kGK7c-00037S-JO; Thu, 10 Sep 2020 06:48:09 -0400 Message-ID: Subject: Re: branch master updated: gnu: Add r-bisquerna. From: Roel Janssen To: Ricardo Wurmus Date: Thu, 10 Sep 2020 12:48:06 +0200 In-Reply-To: <874ko76ins.fsf@elephly.net> References: <20200909150314.13619.80121@vcs0.savannah.gnu.org> <874ko76ins.fsf@elephly.net> Content-Type: text/plain; charset="UTF-8" X-Mailer: Evolution 3.28.5-0ubuntu0.18.04.2 Mime-Version: 1.0 Content-Transfer-Encoding: 7bit X-BeenThere: guix-devel@gnu.org X-Mailman-Version: 2.1.23 Precedence: list List-Id: "Development of GNU Guix and the GNU System distribution." List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Cc: guix-devel@gnu.org, guix-commits@gnu.org Errors-To: guix-devel-bounces+larch=yhetil.org@gnu.org Sender: "Guix-devel" X-Scanner: scn0 Authentication-Results: aspmx1.migadu.com; dkim=none; dmarc=none; spf=pass (aspmx1.migadu.com: domain of guix-devel-bounces@gnu.org designates 209.51.188.17 as permitted sender) smtp.mailfrom=guix-devel-bounces@gnu.org X-Spam-Score: -0.51 X-TUID: ZsjJg5B3KxVL Hi Ricardo, On Wed, 2020-09-09 at 18:04 +0200, Ricardo Wurmus wrote: > Hi Roel, > > > This is an automated email from the git hooks/post-receive script. > > > > roelj pushed a commit to branch master > > in repository guix. > > > > The following commit(s) were added to refs/heads/master by this > > push: > > new 0574446 gnu: Add r-bisquerna. > > 0574446 is described below > > > > commit 0574446be82ef54b925441e4283bf754a86918a9 > > Author: Roel Janssen > > AuthorDate: Wed Sep 9 17:02:55 2020 +0200 > > > > gnu: Add r-bisquerna. > > > > * gnu/packages/bioinformatics.scm (r-bisquerna): New variable. > > --- > > gnu/packages/bioinformatics.scm | 25 +++++++++++++++++++++++++ > > 1 file changed, 25 insertions(+) > > > > diff --git a/gnu/packages/bioinformatics.scm > > b/gnu/packages/bioinformatics.scm > > index f8792ef..9f2fd86 100644 > > --- a/gnu/packages/bioinformatics.scm > > +++ b/gnu/packages/bioinformatics.scm > > @@ -7923,6 +7923,31 @@ manipulating genomic intervals and variables > > defined along a genome.") > > on Bioconductor or which replace R functions.") > > (license license:artistic2.0))) > > > > +(define-public r-bisquerna > > + (package > > + (name "r-bisquerna") > > + (version "1.0.4") > > + (source (origin > > + (method url-fetch) > > + (uri (cran-uri "BisqueRNA" version)) > > + (sha256 > > + (base32 > > + "01g34n87ml7n3pck77497ddgbv3rr5p4153ac8ninpgjijlm3jw > > 2")))) > > Why is this in (gnu packages bioinformatics) and not in (gnu packages > cran)? It seemed so "bioinformatics"-specific. But you're right, it's a CRAN package, so that may be a better fit. Shall I move it to CRAN? > > + (synopsis "Decomposition of Bulk Expression with Single-Cell > > Sequencing") > > Please use lowercase where it would be normally used. My mistake. I will take better care of this in the future. Kind regards, Roel Janssen