From mboxrd@z Thu Jan 1 00:00:00 1970 Return-Path: Received: from mp1 ([2001:41d0:2:4a6f::]) (using TLSv1.3 with cipher TLS_AES_256_GCM_SHA384 (256/256 bits)) by ms11 with LMTPS id GGGqDu3et1/tWAAA0tVLHw (envelope-from ) for ; Fri, 20 Nov 2020 15:21:17 +0000 Received: from aspmx1.migadu.com ([2001:41d0:2:4a6f::]) (using TLSv1.3 with cipher TLS_AES_256_GCM_SHA384 (256/256 bits)) by mp1 with LMTPS id 4F+hCu3et187KQAAbx9fmQ (envelope-from ) for ; Fri, 20 Nov 2020 15:21:17 +0000 Received: from lists.gnu.org (lists.gnu.org [209.51.188.17]) (using TLSv1.2 with cipher ECDHE-RSA-AES256-GCM-SHA384 (256/256 bits)) (No client certificate requested) by aspmx1.migadu.com (Postfix) with ESMTPS id D77F59405D1 for ; Fri, 20 Nov 2020 15:21:16 +0000 (UTC) Received: from localhost ([::1]:60778 helo=lists1p.gnu.org) by lists.gnu.org with esmtp (Exim 4.90_1) (envelope-from ) id 1kg8Dr-0004bj-Pi for larch@yhetil.org; Fri, 20 Nov 2020 10:21:15 -0500 Received: from eggs.gnu.org ([2001:470:142:3::10]:45494) by lists.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from ) id 1kg8Di-0004bM-DY for guix-devel@gnu.org; Fri, 20 Nov 2020 10:21:06 -0500 Received: from mail-qt1-x82c.google.com ([2607:f8b0:4864:20::82c]:41860) by eggs.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_128_GCM_SHA256:128) (Exim 4.90_1) (envelope-from ) id 1kg8Dg-0001YF-Kd; Fri, 20 Nov 2020 10:21:06 -0500 Received: by mail-qt1-x82c.google.com with SMTP id l7so1004182qtp.8; Fri, 20 Nov 2020 07:21:03 -0800 (PST) DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/relaxed; d=gmail.com; s=20161025; h=mime-version:references:in-reply-to:from:date:message-id:subject:to :cc:content-transfer-encoding; bh=S5K/uTKCX0C//l04ma+Oh9km9nwcXJkcoQ4oO2I704s=; b=uXHdNbzaMGE0s9T1Mx9BGNNny5MpomoHM0HxnXeaa/5se5Dx+oEqmbg+6M2RQDHvXy QV4z3J07JTkLS0gdkubRWanzm8YpWIy717UVyR3Oqng3VoDaDJNFBltdQqiM7ZLPLsq7 943aSDFQoKo1pPcVIlHqpIocKrISEcOJnhia1m3KBpeOEJEVqnjmBtYDuUv1CQAuugtA 1zVr0ITNryoJ/HqyJEubUtMwd3ccD61yIoD2fCiBww8IZv83ZnnL8ctFUrHrGxLG4xNY 486ZeL0OV+TyxNp4b875M/wtp0z0MKd/QQYiIXbW8Z66gzAwqSQF9nwtEQBqmBex54RU IoUw== X-Google-DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/relaxed; d=1e100.net; s=20161025; h=x-gm-message-state:mime-version:references:in-reply-to:from:date :message-id:subject:to:cc:content-transfer-encoding; bh=S5K/uTKCX0C//l04ma+Oh9km9nwcXJkcoQ4oO2I704s=; b=gDlFedzo5fjGyDXin3RY/DzN20rE3mQT6ESutJ+oIwlPB5prs0+bfxCkvEkbX3+Pbo 4dUfTKMlzom7wWDSzzTiXf5Dr2PLrx43wmMrG5RTGJUyHqliDrXEMGxUWl976qc8Idp8 AVVMOues4nOJ1utIWh4UKWfsRael3xIwnca7kDfCJBq8yHZugNW1AmN5MoTHAncaVgIy McAuASn5ri14KjITKk3go8VvYTmZsWfDXxSxLvxbmcUvkpdh/4arHyfZYGj54B/zgWG4 ocwt2Urk07KHNnEx9oVM6a/hrerzao9mmxeWvx0prB49ifcopxeD8CvylNZlELkyhAQ/ 9jpA== X-Gm-Message-State: AOAM531qi/wejLEdHuZO04FP5hNV80/lhn546Pr5NnJw3z800KSuPHI3 NitaTiQbXFRo7aOVATV23UIj05BC+PrcflqX7t0ris2irfM= X-Google-Smtp-Source: ABdhPJz5yXooVMTjqpJityE0GIXWlOgCtHgqg7fN/sPIwmmO+/gyXfF3ZIWjnjSTk7FzRSnC4FhMgyQ8gJW8E1yU14c= X-Received: by 2002:aed:3207:: with SMTP id y7mr6794803qtd.217.1605885662866; Fri, 20 Nov 2020 07:21:02 -0800 (PST) MIME-Version: 1.0 References: <86tutnmvyn.fsf@gmail.com> <63ad286432442f3c6c22acf60b50632d1a4d4b8d.camel@gnu.org> <0f3a95cbcbefec60a9a239f39eefa7a991272dc9.camel@gnu.org> <873615aw3m.fsf@elephly.net> <63ba88365933ab9878eaa040ee4190ffdebbc41a.camel@gnu.org> <87zh3c9mgh.fsf@elephly.net> <87r1oo9k72.fsf@elephly.net> In-Reply-To: <87r1oo9k72.fsf@elephly.net> From: zimoun Date: Fri, 20 Nov 2020 16:20:51 +0100 Message-ID: Subject: Re: Updating to latest Bioconductor release To: Ricardo Wurmus Content-Type: text/plain; charset="UTF-8" Content-Transfer-Encoding: quoted-printable Received-SPF: pass client-ip=2607:f8b0:4864:20::82c; envelope-from=zimon.toutoune@gmail.com; helo=mail-qt1-x82c.google.com X-Spam_score_int: -20 X-Spam_score: -2.1 X-Spam_bar: -- X-Spam_report: (-2.1 / 5.0 requ) BAYES_00=-1.9, DKIM_SIGNED=0.1, DKIM_VALID=-0.1, DKIM_VALID_AU=-0.1, DKIM_VALID_EF=-0.1, FREEMAIL_FROM=0.001, RCVD_IN_DNSWL_NONE=-0.0001, SPF_HELO_NONE=0.001, SPF_PASS=-0.001 autolearn=ham autolearn_force=no X-Spam_action: no action X-BeenThere: guix-devel@gnu.org X-Mailman-Version: 2.1.23 Precedence: list List-Id: "Development of GNU Guix and the GNU System distribution." List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Cc: Guix Devel Errors-To: guix-devel-bounces+larch=yhetil.org@gnu.org Sender: "Guix-devel" X-Scanner: ns3122888.ip-94-23-21.eu Authentication-Results: aspmx1.migadu.com; dkim=fail (headers rsa verify failed) header.d=gmail.com header.s=20161025 header.b=uXHdNbza; dmarc=fail reason="SPF not aligned (relaxed)" header.from=gmail.com (policy=none); spf=pass (aspmx1.migadu.com: domain of guix-devel-bounces@gnu.org designates 209.51.188.17 as permitted sender) smtp.mailfrom=guix-devel-bounces@gnu.org X-Spam-Score: 0.09 X-TUID: fyRMS5PoXbmN On Fri, 20 Nov 2020 at 15:26, Ricardo Wurmus wrote: > > Just to understand for the next time: when should the commit upgrading > > the %bioconductor-version be done? First one or last one? > > > > (I am speaking of this kind of commit: ac6a55e68a6ed675a55abc5339f77661= 3648cb9d) > > It doesn=E2=80=99t really matter; usually I do this first, so that for al= l > following commits the fallback URL is going to be the correct new URL. > I haven=E2=80=99t thought much about this, so there may be reasons involv= ing > =E2=80=9Cguix time-machine=E2=80=9D that are for or against that position= . I will think a bit about that; especially related to #39885. > It should, in my opinion, be done together with the other change to the > version string. Yes, for sure. :-) > We can and should rewrite history in the wip-r branch. So if you have a > fix you can add a new commit on top of wip-r branch and mark it so that > someone later can reorder and squash it before the merge into the master > branch. > > To avoid stepping on each other=E2=80=99s toes we should be adding commit= s to > the top and then agree on a freeze to reorder and squash those commits > in the end. Ok, that's make sense. Thanks. All the best, simon