From mboxrd@z Thu Jan 1 00:00:00 1970 Return-Path: Received: from mp1 ([2001:41d0:2:4a6f::]) (using TLSv1.3 with cipher TLS_AES_256_GCM_SHA384 (256/256 bits)) by ms11 with LMTPS id sclBN3pMtV8tcQAA0tVLHw (envelope-from ) for ; Wed, 18 Nov 2020 16:31:54 +0000 Received: from aspmx1.migadu.com ([2001:41d0:2:4a6f::]) (using TLSv1.3 with cipher TLS_AES_256_GCM_SHA384 (256/256 bits)) by mp1 with LMTPS id 8F9zMnpMtV8rfAAAbx9fmQ (envelope-from ) for ; Wed, 18 Nov 2020 16:31:54 +0000 Received: from lists.gnu.org (lists.gnu.org [209.51.188.17]) (using TLSv1.2 with cipher ECDHE-RSA-AES256-GCM-SHA384 (256/256 bits)) (No client certificate requested) by aspmx1.migadu.com (Postfix) with ESMTPS id A6A2A940482 for ; Wed, 18 Nov 2020 16:31:54 +0000 (UTC) Received: from localhost ([::1]:36544 helo=lists1p.gnu.org) by lists.gnu.org with esmtp (Exim 4.90_1) (envelope-from ) id 1kfQN7-0000B1-Jx for larch@yhetil.org; Wed, 18 Nov 2020 11:31:53 -0500 Received: from eggs.gnu.org ([2001:470:142:3::10]:51818) by lists.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from ) id 1kfQFd-0001Ew-1n for guix-devel@gnu.org; Wed, 18 Nov 2020 11:24:09 -0500 Received: from mail-qt1-x82d.google.com ([2607:f8b0:4864:20::82d]:45723) by eggs.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_128_GCM_SHA256:128) (Exim 4.90_1) (envelope-from ) id 1kfQFa-0002bn-0c; Wed, 18 Nov 2020 11:24:08 -0500 Received: by mail-qt1-x82d.google.com with SMTP id v11so1971721qtq.12; Wed, 18 Nov 2020 08:24:01 -0800 (PST) DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/relaxed; d=gmail.com; s=20161025; h=mime-version:references:in-reply-to:from:date:message-id:subject:to :cc; bh=cg0jRFIWFo/OPbqf4Bf3wVCHniZgy4gUFK7CBbe7S68=; b=MOTKD0BHH+iAQCmq5V7l/NWJnDbId1GvOG/+ho7sf+7xJrvK36kJYOsIgQDrE5ueXi fCUAZNeX+YvdhZbZrFCf5qDM95g0k7dldEEHTH53xQPk6MdMtpXqgaBRl1bGr+V1TOjO 8EOS1/y5/hJFRC/ovr3HF6mrRwF5LtpZl+9ClVVU5V90GpW5uo6ycVuL89iMbyQon3pF lSHBU6lvjqqO3O3c8tAxfTAFpWKWlw079n+GqViO9oSUZbGTVoCPL/rzsgtTe+B922+F ekKpf4ECRtMss9YaovxHFRCz5nyulj4M5MhxbZQDwrkzddisP5JyGpRTyARPk3WMkjI9 LI/w== X-Google-DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/relaxed; d=1e100.net; s=20161025; h=x-gm-message-state:mime-version:references:in-reply-to:from:date :message-id:subject:to:cc; bh=cg0jRFIWFo/OPbqf4Bf3wVCHniZgy4gUFK7CBbe7S68=; b=BT6XxbOKB73zy48GlrCdC5h8y7xgJ93utFrZv+qoIl5PDHGWC+e9cCxNh7+smW1Gh4 bY+/8gOG2B/w2qGIT8bFmQIfcr3vbwaafqLwzg+pD8iwU8UtEX9RMZ13pCMrMngpsdDX aqBRQok+mya730n2MKIZqV6BOAcH1nNLQYxqu8EfBhOlh8w9cgClFaWXmtknN5Vy5jgG aAGc9PkXPLKYpbHC5iTN6TKqbSKO/yNUxeqGpB5r85FzY0gtizNAUvZBCApOyujwmFpM kPUD+kuHfPmouLIEAQuyRVzG1LQYMDDnggMsWjY077l2s9nlEl5RrvfCnAMHkrAPOUyI UGMg== X-Gm-Message-State: AOAM531YT0oaJl3TvWVSemNt7LvD2KdYSqeFa/SazP/yAsYgXdA7OcuB q57xgaJchzaGVbozqNS8spBHaE4jCQ4jAu7c9/j1wxyl X-Google-Smtp-Source: ABdhPJyV1zzwnGndyaRSd0IYa2c6uatLB0zgKhXHkKB6vugnbRX8IL6OBuCwUPm3qMCZY26sKluVzPQ6ykorhbrsdnQ= X-Received: by 2002:ac8:41d4:: with SMTP id o20mr4805814qtm.313.1605716640941; Wed, 18 Nov 2020 08:24:00 -0800 (PST) MIME-Version: 1.0 References: <86tutnmvyn.fsf@gmail.com> <63ad286432442f3c6c22acf60b50632d1a4d4b8d.camel@gnu.org> In-Reply-To: From: zimoun Date: Wed, 18 Nov 2020 17:23:49 +0100 Message-ID: Subject: Re: Updating to latest Bioconductor release To: Roel Janssen Content-Type: text/plain; charset="UTF-8" Received-SPF: pass client-ip=2607:f8b0:4864:20::82d; envelope-from=zimon.toutoune@gmail.com; helo=mail-qt1-x82d.google.com X-detected-operating-system: by eggs.gnu.org: No matching host in p0f cache. That's all we know. X-Spam_score_int: -20 X-Spam_score: -2.1 X-Spam_bar: -- X-Spam_report: (-2.1 / 5.0 requ) BAYES_00=-1.9, DKIM_SIGNED=0.1, DKIM_VALID=-0.1, DKIM_VALID_AU=-0.1, DKIM_VALID_EF=-0.1, FREEMAIL_FROM=0.001, RCVD_IN_DNSWL_NONE=-0.0001, SPF_HELO_NONE=0.001, SPF_PASS=-0.001 autolearn=ham autolearn_force=no X-Spam_action: no action X-BeenThere: guix-devel@gnu.org X-Mailman-Version: 2.1.23 Precedence: list List-Id: "Development of GNU Guix and the GNU System distribution." List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Cc: Guix Devel Errors-To: guix-devel-bounces+larch=yhetil.org@gnu.org Sender: "Guix-devel" X-Scanner: ns3122888.ip-94-23-21.eu Authentication-Results: aspmx1.migadu.com; dkim=pass header.d=gmail.com header.s=20161025 header.b=MOTKD0BH; dmarc=pass (policy=none) header.from=gmail.com; spf=pass (aspmx1.migadu.com: domain of guix-devel-bounces@gnu.org designates 209.51.188.17 as permitted sender) smtp.mailfrom=guix-devel-bounces@gnu.org X-Spam-Score: -1.71 X-TUID: 2vr9v1w16vxw Hi Roel, On Wed, 18 Nov 2020 at 17:13, Roel Janssen wrote: > I pushed updates and fixes for various packages. Now I'm at r- > rhdf5lib. Cool! > In 38881c9368595c5a894abe3695d98aabb1ef0029 you updated it to 1.12.0, > but it seems that building has changed quite a bit. I wonder how it > could've built for you? I have not. The idea proposed by Ricardo was to update everything and let Cuirass build. BTW, I do not have enough power at hand to rebuild all the BioConductor packages. Thank you for working on it. All the best, simon