From mboxrd@z Thu Jan 1 00:00:00 1970 Return-Path: Received: from mp0 ([2001:41d0:2:4a6f::]) (using TLSv1.3 with cipher TLS_AES_256_GCM_SHA384 (256/256 bits)) by ms11 with LMTPS id uOvIEMgvqV/kTwAA0tVLHw (envelope-from ) for ; Mon, 09 Nov 2020 12:02:16 +0000 Received: from aspmx1.migadu.com ([2001:41d0:2:4a6f::]) (using TLSv1.3 with cipher TLS_AES_256_GCM_SHA384 (256/256 bits)) by mp0 with LMTPS id MIevDMgvqV8wLgAA1q6Kng (envelope-from ) for ; Mon, 09 Nov 2020 12:02:16 +0000 Received: from lists.gnu.org (lists.gnu.org [209.51.188.17]) (using TLSv1.2 with cipher ECDHE-RSA-AES256-GCM-SHA384 (256/256 bits)) (No client certificate requested) by aspmx1.migadu.com (Postfix) with ESMTPS id 02095940119 for ; Mon, 9 Nov 2020 12:02:15 +0000 (UTC) Received: from localhost ([::1]:38592 helo=lists1p.gnu.org) by lists.gnu.org with esmtp (Exim 4.90_1) (envelope-from ) id 1kc5sE-0002zs-K9 for larch@yhetil.org; Mon, 09 Nov 2020 07:02:14 -0500 Received: from eggs.gnu.org ([2001:470:142:3::10]:34394) by lists.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from ) id 1kc5rj-0002ye-FH for guix-devel@gnu.org; Mon, 09 Nov 2020 07:01:44 -0500 Received: from mail-qk1-x730.google.com ([2607:f8b0:4864:20::730]:41744) by eggs.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_128_GCM_SHA256:128) (Exim 4.90_1) (envelope-from ) id 1kc5rc-0000WJ-2p; Mon, 09 Nov 2020 07:01:43 -0500 Received: by mail-qk1-x730.google.com with SMTP id d9so507139qke.8; Mon, 09 Nov 2020 04:01:35 -0800 (PST) DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/relaxed; d=gmail.com; s=20161025; h=mime-version:references:in-reply-to:from:date:message-id:subject:to :cc:content-transfer-encoding; bh=yr3CBfhE77x5l6pRTHV5WASE2lN9b0aYqBct1vcr1x0=; b=j6tgvn4gVWrvMZjxJmNTzejtj1t+NtZlaqWHvyzezj2i+vBQbPw+AqyMtt4mQvOoTK 6cUUkkKZt0ByoVLAHJWdmwZX0Y8zRxU6Bwa+PdlMA3meUu6mxaNq5i0FwumTLvKS7Zip 2zO14PoMDxuQaJOI73wxT4Ufhb4IdRs7M6RbKQmKhJmjJ+slQ8bf70rKFlObKqSTxCFl RSpj1C2/tI6wZYOMbiwDuUJ2npVkSw9AiNCMO0M9z1EdA83akf1+nok3k/7ELkMCLgiY 81iHp+/WFgbIfr+tEOMSV31rqwJGCpIxP5NbBS/OimSnHu5UQKqz80B+OQ8h3XICNGNR Ntpw== X-Google-DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/relaxed; d=1e100.net; s=20161025; h=x-gm-message-state:mime-version:references:in-reply-to:from:date :message-id:subject:to:cc:content-transfer-encoding; bh=yr3CBfhE77x5l6pRTHV5WASE2lN9b0aYqBct1vcr1x0=; b=UvoPLsGzoL2pnmUfyRv1RGmSK4vQsdYQh7y4qomnFD7CtKLrxs++npf1XnefVRo06a iNskwgkanPIwZ/sVOhhXBjbBh5tgPHcd7nxYoN6XK76fzI1W4TA8W2exdbHpPvN7y6zP omWOaH6tA2nOjy/DVSukLLze2uFKyOZubZNNh/AkCyWfaQh0tQSl6foISI8Kdwuh9oDY FLdrX6FB6bWIJsMIklVDIBJOEgfAFD/Q0Ak46VZ0pgpikgkTkAGoTZEQdYKDINl1Gk6n GAMBRgS3oyJdbDdMrsFZgehC8yr9+y6GPJjPsPVPj8XL4IPHhcOBp/e27UA1YTpdXctR ugfg== X-Gm-Message-State: AOAM5334p2C0hMhy8X3UYGK/entP89kCDUR4z7obEl4AhlqFSCKYrWlK jTPGVSU8TJkeN/fNY/YQ9D1prPZWqgKlq2DY2kffB54nKX4= X-Google-Smtp-Source: ABdhPJz/uexsLyNw9CP/nl0iHIIjGfzlvmYp9Ee7d58qXPi1dWaGAM2v/ya1nEKq52+EsNGi9l55W1m+krUc2vqTkTE= X-Received: by 2002:a05:620a:5a6:: with SMTP id q6mr6818355qkq.80.1604923293702; Mon, 09 Nov 2020 04:01:33 -0800 (PST) MIME-Version: 1.0 References: <87v9eldm7p.fsf@gmail.com> <87a6vu242d.fsf@gnu.org> <86eel6nwxw.fsf@gmail.com> <87a6vrvjk9.fsf@gnu.org> In-Reply-To: <87a6vrvjk9.fsf@gnu.org> From: zimoun Date: Mon, 9 Nov 2020 13:01:22 +0100 Message-ID: Subject: =?UTF-8?B?UmU6IOKAnGd1aXggcGFjayAtUlIgcuKAnCBmYWlscz8=?= To: =?UTF-8?Q?Ludovic_Court=C3=A8s?= Content-Type: text/plain; charset="UTF-8" Content-Transfer-Encoding: quoted-printable Received-SPF: pass client-ip=2607:f8b0:4864:20::730; envelope-from=zimon.toutoune@gmail.com; helo=mail-qk1-x730.google.com X-detected-operating-system: by eggs.gnu.org: No matching host in p0f cache. That's all we know. X-Spam_score_int: -20 X-Spam_score: -2.1 X-Spam_bar: -- X-Spam_report: (-2.1 / 5.0 requ) BAYES_00=-1.9, DKIM_SIGNED=0.1, DKIM_VALID=-0.1, DKIM_VALID_AU=-0.1, DKIM_VALID_EF=-0.1, FREEMAIL_FROM=0.001, RCVD_IN_DNSWL_NONE=-0.0001, SPF_HELO_NONE=0.001, SPF_PASS=-0.001 autolearn=ham autolearn_force=no X-Spam_action: no action X-BeenThere: guix-devel@gnu.org X-Mailman-Version: 2.1.23 Precedence: list List-Id: "Development of GNU Guix and the GNU System distribution." List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Cc: Guix Devel Errors-To: guix-devel-bounces+larch=yhetil.org@gnu.org Sender: "Guix-devel" X-Scanner: ns3122888.ip-94-23-21.eu Authentication-Results: aspmx1.migadu.com; dkim=pass header.d=gmail.com header.s=20161025 header.b=j6tgvn4g; dmarc=pass (policy=none) header.from=gmail.com; spf=pass (aspmx1.migadu.com: domain of guix-devel-bounces@gnu.org designates 209.51.188.17 as permitted sender) smtp.mailfrom=guix-devel-bounces@gnu.org X-Spam-Score: -0.71 X-TUID: ZXmTAzBuQz0R Hi, On Sun, 8 Nov 2020 at 18:34, Ludovic Court=C3=A8s wrote: > Oh right, you=E2=80=99d need to pick a different execution engine, most l= ikely > =E2=80=98fakechroot=E2=80=99 is the only one that works on this machine: > > export GUIX_EXECUTION_ENGINE=3Dfakechroot > strace -f -s 500 -o log ./bin/R Hum? I do not know if I am doing correctly. The packages fakechroot-2.9-24.5.el6_1.1.x86_64.rpm and fakechroot-libs-2.9-24.5.el6_1.1.x86_64.rpm are installed. And I get as regular user: --8<---------------cut here---------------start------------->8--- $ export GUIX_EXECUTION_ENGINE=3Dfakechroot $ strace -f -s 500 -o logg ./bin/R fakechroot: unsupported Guix execution engine; ignoring ./bin/Rproot error: ptrace(TRACEME): Operation not permitted proot error: execve("/gnu/store/nqqhaz59gdr5q6mb6mw9dd8jk133rna2-r-minimal-= 4.0.3/bin/R"): Operation not permitted proot info: possible causes: * the program is a script but its interpreter (eg. /bin/sh) was not found= ; * the program is an ELF but its interpreter (eg. ld-linux.so) was not fou= nd; * the program is a foreign binary but qemu was not specified; * qemu does not work correctly (if specified); * the loader was not found or doesn't work. fatal error: see `proot --help`. proot error: can't chmod '/tmp/proot-41950-9kDMBf': No such file or directo= ry --8<---------------cut here---------------end--------------->8--- However, as root, simply running ./bin/R returns: --8<---------------cut here---------------start------------->8--- # ./bin/R R: run.c:245: disallow_setgroups: Unexpected error: No such file or directo= ry. Abandon [root@HEAD foo]# R version 4.0.3 (2020-10-10) -- "Bunny-Wunnies Freak Out" Copyright (C) 2020 The R Foundation for Statistical Computing Platform: x86_64-unknown-linux-gnu (64-bit) R is free software and comes with ABSOLUTELY NO WARRANTY. You are welcome to redistribute it under certain conditions. Type 'license()' or 'licence()' for distribution details. R is a collaborative project with many contributors. Type 'contributors()' for more information and 'citation()' on how to cite R or R packages in publications. Type 'demo()' for some demos, 'help()' for on-line help, or 'help.start()' for an HTML browser interface to help. Type 'q()' to quit R. During startup - Warning messages: 1: Setting LC_CTYPE failed, using "C" 2: Setting LC_COLLATE failed, using "C" 3: Setting LC_TIME failed, using "C" 4: Setting LC_MESSAGES failed, using "C" 5: Setting LC_MONETARY failed, using "C" 6: Setting LC_PAPER failed, using "C" 7: Setting LC_MEASUREMENT failed, using "C" > --8<---------------cut here---------------end--------------->8--- All the best, simon