From mboxrd@z Thu Jan 1 00:00:00 1970 Return-Path: Received: from mp2 ([2001:41d0:2:4a6f::]) (using TLSv1.3 with cipher TLS_AES_256_GCM_SHA384 (256/256 bits)) by ms11 with LMTPS id AAwzDF1TtV9PJAAA0tVLHw (envelope-from ) for ; Wed, 18 Nov 2020 17:01:17 +0000 Received: from aspmx1.migadu.com ([2001:41d0:2:4a6f::]) (using TLSv1.3 with cipher TLS_AES_256_GCM_SHA384 (256/256 bits)) by mp2 with LMTPS id iLwcCF1TtV/2fgAAB5/wlQ (envelope-from ) for ; Wed, 18 Nov 2020 17:01:17 +0000 Received: from lists.gnu.org (lists.gnu.org [209.51.188.17]) (using TLSv1.2 with cipher ECDHE-RSA-AES256-GCM-SHA384 (256/256 bits)) (No client certificate requested) by aspmx1.migadu.com (Postfix) with ESMTPS id EB097940482 for ; Wed, 18 Nov 2020 17:01:16 +0000 (UTC) Received: from localhost ([::1]:40492 helo=lists1p.gnu.org) by lists.gnu.org with esmtp (Exim 4.90_1) (envelope-from ) id 1kfQpX-00074O-Lw for larch@yhetil.org; Wed, 18 Nov 2020 12:01:15 -0500 Received: from eggs.gnu.org ([2001:470:142:3::10]:33114) by lists.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from ) id 1kfQoO-0006w0-Qh for guix-devel@gnu.org; Wed, 18 Nov 2020 12:00:04 -0500 Received: from mail-qk1-x735.google.com ([2607:f8b0:4864:20::735]:42004) by eggs.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_128_GCM_SHA256:128) (Exim 4.90_1) (envelope-from ) id 1kfQoN-0007iD-00; Wed, 18 Nov 2020 12:00:04 -0500 Received: by mail-qk1-x735.google.com with SMTP id 199so2439801qkg.9; Wed, 18 Nov 2020 09:00:02 -0800 (PST) DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/relaxed; d=gmail.com; s=20161025; h=mime-version:references:in-reply-to:from:date:message-id:subject:to :cc; bh=oOt4iRv6eXJwScNr+aOX2e6UiCHvZR/RkPTV3rfPGII=; b=HJONbc2vKDOlfXOyNsu6YDIxl2oL/VGHSW7iEbr2NC0f3abWcejVrbmYAvbsdJ32DF pscYBJrntLzjg/RrFMiqUKH9bw5M3OMNm1LlQy3UhZ3fcWEKWNxR5grODzdKXxQmVTZW uqElz7/kMMsxv3ENtW+sSizwCR0IVRNxUwYwXWdxUNNsgaXwQnmCGXnMg7GHHfnp36L8 sg+7i9RgRGv0Wl51xty45nusr/0nVb0lMgmKpw7X95xq8veh9TemjMdjAn8QvkRYtmc6 jYKI4kihYOpaS6Ik5CEeonKwljMnRGQ6RlGDvkH13rWPk7d8oRgwzYq22aZGQaB9XyN2 GTNQ== X-Google-DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/relaxed; d=1e100.net; s=20161025; h=x-gm-message-state:mime-version:references:in-reply-to:from:date :message-id:subject:to:cc; bh=oOt4iRv6eXJwScNr+aOX2e6UiCHvZR/RkPTV3rfPGII=; b=K11O+Eg4+nawK55UqkS+P7g5zWjqyNvPENeKavFoRR4smGFXCXKRnlYyhFlX9dxxva rCxyHqW8xFOvClaVQ7fQWDlFDE4PLuUNysYcJHP+L1XXD3tTLNAmEHG9dBUtHRFFNZnN uDOeMqf56qCLATWrPhPGGCciwDbzjKwn94L4c/poJDdpPd9BACxgL+1qwA2XJhFvQU0h h1oTonvgNr5HSNWmGoC8riP5B8Ru+UsWLA4V9BYUD4tY6T8wp1e2Bgpp2qG1kOGsB78F QnoIl5GvmNJeByIiUmpL3GaArEFdirfhDlC/BRv7LKMPrwJVdZOQ1oF+J++MuBnrqq5g X8Fg== X-Gm-Message-State: AOAM530Ct4CP6rEPyNfBXGvj6fdWEjqQmoA6ecvM3yYoFRvBUedr6rju xmGoczSjgsHfysiHv4Qp9KO/j8eFY8kdloSE6CgPfLC+JRM= X-Google-Smtp-Source: ABdhPJw63dBSKTMs7CP1jUKf/43/qYo5Zm2USdk7hOEPMqV15vWHX/2rHlLV3VrtsbM9oGXTTfgt93Eymg1tWQhV6lg= X-Received: by 2002:a37:a54f:: with SMTP id o76mr5242339qke.201.1605718801274; Wed, 18 Nov 2020 09:00:01 -0800 (PST) MIME-Version: 1.0 References: <86tutnmvyn.fsf@gmail.com> <63ad286432442f3c6c22acf60b50632d1a4d4b8d.camel@gnu.org> In-Reply-To: From: zimoun Date: Wed, 18 Nov 2020 17:59:50 +0100 Message-ID: Subject: Re: Updating to latest Bioconductor release To: Roel Janssen Content-Type: text/plain; charset="UTF-8" Received-SPF: pass client-ip=2607:f8b0:4864:20::735; envelope-from=zimon.toutoune@gmail.com; helo=mail-qk1-x735.google.com X-detected-operating-system: by eggs.gnu.org: No matching host in p0f cache. That's all we know. X-Spam_score_int: -20 X-Spam_score: -2.1 X-Spam_bar: -- X-Spam_report: (-2.1 / 5.0 requ) BAYES_00=-1.9, DKIM_SIGNED=0.1, DKIM_VALID=-0.1, DKIM_VALID_AU=-0.1, DKIM_VALID_EF=-0.1, FREEMAIL_FROM=0.001, RCVD_IN_DNSWL_NONE=-0.0001, SPF_HELO_NONE=0.001, SPF_PASS=-0.001 autolearn=ham autolearn_force=no X-Spam_action: no action X-BeenThere: guix-devel@gnu.org X-Mailman-Version: 2.1.23 Precedence: list List-Id: "Development of GNU Guix and the GNU System distribution." List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Cc: Guix Devel Errors-To: guix-devel-bounces+larch=yhetil.org@gnu.org Sender: "Guix-devel" X-Scanner: ns3122888.ip-94-23-21.eu Authentication-Results: aspmx1.migadu.com; dkim=pass header.d=gmail.com header.s=20161025 header.b=HJONbc2v; dmarc=pass (policy=none) header.from=gmail.com; spf=pass (aspmx1.migadu.com: domain of guix-devel-bounces@gnu.org designates 209.51.188.17 as permitted sender) smtp.mailfrom=guix-devel-bounces@gnu.org X-Spam-Score: -1.71 X-TUID: +FEfYShpbVP/ On Wed, 18 Nov 2020 at 17:33, Roel Janssen wrote: > Okay. Then I'll look into it. I currently have only these left as > changed in my tree: > - r-atacseqqc: Needs r-rhdf5lib. > - r-cytoml: Needs r-rhdf5lib. > - r-scater: Needs r-rhdf5lib. > - r-scuttle (new package for r-scran): Needs r-rhdf5lib. > - r-scran: Needs r-scuttle. Now it rings a bell and I think you missed this email (and I forgot to point you, sorry): # NOT DONE r-rhdf5lib: consider removing this native input: hdf5-source r-rhdf5lib: consider removing this propagated input: hdf5 https://lists.gnu.org/archive/html/guix-devel/2020-11/msg00047.html > So it seems we are almost there. Cool! > I pushed the rest to the wip-r branch. I will give a look on Friday. Because of lockdown, today and tomorrow, I have to be at the office and do some boring stuff with physical access (plug/unplug, reboot, etc.) Thanks, simon