From mboxrd@z Thu Jan 1 00:00:00 1970 From: =?UTF-8?Q?G=C3=A1bor_Boskovits?= Subject: Re: [outreach] Help trying to create R package Date: Fri, 19 Oct 2018 20:45:06 +0200 Message-ID: References: <20181016074412.54757b18@alma-ubu> <20181016082350.75757e6b@alma-ubu> <20181017001851.71543cc9@alma-ubu> <20181017091750.1c408b8d@alma-ubu> <20181018085424.541e9287@alma-ubu> <87va5zktpa.fsf@elephly.net> <87r2gml8ec.fsf@elephly.net> Mime-Version: 1.0 Content-Type: text/plain; charset="UTF-8" Content-Transfer-Encoding: quoted-printable Return-path: Received: from eggs.gnu.org ([2001:4830:134:3::10]:51188) by lists.gnu.org with esmtp (Exim 4.71) (envelope-from ) id 1gDZlx-0008Hc-T2 for guix-devel@gnu.org; Fri, 19 Oct 2018 14:45:22 -0400 Received: from Debian-exim by eggs.gnu.org with spam-scanned (Exim 4.71) (envelope-from ) id 1gDZlw-00068X-NI for guix-devel@gnu.org; Fri, 19 Oct 2018 14:45:21 -0400 Received: from mail-oi1-x243.google.com ([2607:f8b0:4864:20::243]:43844) by eggs.gnu.org with esmtps (TLS1.0:RSA_AES_128_CBC_SHA1:16) (Exim 4.71) (envelope-from ) id 1gDZlw-00067l-7n for guix-devel@gnu.org; Fri, 19 Oct 2018 14:45:20 -0400 Received: by mail-oi1-x243.google.com with SMTP id s69-v6so27562463oie.10 for ; Fri, 19 Oct 2018 11:45:19 -0700 (PDT) In-Reply-To: List-Id: "Development of GNU Guix and the GNU System distribution." List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: guix-devel-bounces+gcggd-guix-devel=m.gmane.org@gnu.org Sender: "Guix-devel" To: Laura Lazzati Cc: Guix-devel Hello Laura, Laura Lazzati ezt =C3=ADrta (id=C5=91pont: 201= 8. okt. 19., P, 20:37): > > On Fri, Oct 19, 2018 at 4:29 AM G=C3=A1bor Boskovits wrote: > > > > Hello Ricardo, > > > > Ricardo Wurmus ezt =C3=ADrta (id=C5=91pont: 2018. = okt. 19., P 9:10): > >> > >> > >> Hi Laura, > >> > >> > with guix environment --pure guix --ad-hoc coreutils findutils which= (or -C) > >> > I get, the output: > >> > Command 'lesspipe' is available in the following places > >> > * /bin/lesspipe > >> > * /usr/bin/lesspipe > >> > The command could not be located because '/bin:/usr/bin' is not > >> > included in the PATH environment variable. > >> > lesspipe: command not found > >> > >> This is because your shell initialization code (e.g. to set up the > >> prompt) refers to lesspipe. You can ignore this or remove the fancy > >> initialization. > >> > >> > There, I run which guix and get: > >> > which: no guix in > >> > (/gnu/store/khk3lpx1li9y5zxzdppn9wi4n5g1qsgs-profile/bin:/gnu/store/= khk3lpx1li9y5zxzdppn9wi4n5g1qsgs-profile/sbin) > >> > >> That=E2=80=99s because =E2=80=9C--pure=E2=80=9D resets the PATH; that= =E2=80=99s by design. The only > >> problem you have is that your Guix is located elsewhere. But why do y= ou > >> need Guix itself inside of an environment to build Guix? > >> > >> The point of using =E2=80=9Cguix environment --pure guix=E2=80=9D is o= nly to enter a > >> clean environment containing everything you need to build Guix from > >> source. So once you=E2=80=99re inside of this environment you can run= the > >> bootstrap and configure scripts, and run make to compile the sources. > >> > >> To *use* that Guix you just built you need to use =E2=80=9C./pre-inst-= env guix=E2=80=9D > >> from the source directory. > >> > >> > The closest I got was by setting: > >> > PATH=3D$PATH:/usr/bin/:/bin > >> > PATH=3D$PATH:/usr/local/bin > >> > >> This defeats the purpose of using =E2=80=9C--pure=E2=80=9D as these di= rectories contain > >> all sorts of things on a foreign distro, so you lose control over the > >> environment. > > I am glad to tell you that I have followed all the commands, I will > copy some of them here just in case, and saved the output in my daily > journal of everything :) > > guix environment --pure guix --ad-hoc coreutils findutils which > ./bootstrap > ./configure --localstatedir=3D/var > make > echo $? ->got 0 > which guix -> got > no guix in (/gnu/store/khk3lpx1li9y5zxzdppn9wi4n5g1qsgs-profile/bin:/gnu/= store/khk3lpx1li9y5zxzdppn9wi4n5g1qsgs-profile/sbin) > ./pre-inst-env guix package --help -> worked fine! > ./pre-inst-env guix package -i hello -> the same > ./pre-inst-env guix package -i emacs > export PATH=3D"/home/laura/.guix-profile/bin${PATH:+:}$PATH" > export INFOPATH=3D"/home/laura/.guix-profile/share/info${INFOPATH:+:}$INF= OPATH" > (with this two exports, I could run hello and emacs without problems) > ./pre-inst-env guix package -i nss-certs > Played a lot with > ./pre-inst-env guix build r-aspi > and > emacs gnu/packages/cran.scm > until I found out that there were syntax errors, mismatches in > parenthesis and so on, and in the last > ./pre-inst-env guix build r-aspi got: > ;;; note: source file /home/laura/guix/gnu/packages/cran.scm > ;;; newer than compiled /home/laura/guix/gnu/packages/cran.go > (still that) but: This is not a problem, it just indicates that you modified cran.scm, and it= will use the .scm file instead, as the .go file was compiled from an older sourc= e. > successfully built /gnu/store/bmapswnk9li1nscfpirgzsy3npw9hyql-r-aspi-0.2= .0.drv > /gnu/store/a3apqwf4hy67ms462hn802gk89x99mzh-r-aspi-0.2.0 > That's great! > I am following the contribution guide now, to send the patch, I ran > ./pre-inst-env guix lint r-aspi > ;;; note: source file /home/laura/guix/gnu/packages/cran.scm > ;;; newer than compiled /home/laura/guix/gnu/packages/cran.go > fetching CVE database for 2018... > fetching CVE database for 2017... > fetching CVE database for 2016... > fetching CVE database for 2015... > > Is this output OK? > Yes, this output is just fine. > > > > > > Sorry, my bad, I missed that. > > > >> > >> -- > >> Ricardo > > > > g_bor > > Regards! > Laura Best regards, g_bor