From: Ricardo Wurmus <rekado@elephly.net>
To: Roel Janssen <roel@gnu.org>
Cc: guix-devel@gnu.org, guix-commits@gnu.org
Subject: Re: branch master updated: gnu: Add r-bisquerna.
Date: Thu, 10 Sep 2020 13:31:29 +0200 [thread overview]
Message-ID: <87blid6f72.fsf@elephly.net> (raw)
In-Reply-To: <aa77dbf012f7de1d919bd9f97a3f069bf62dfd97.camel@gnu.org>
Roel Janssen <roel@gnu.org> writes:
>> > +(define-public r-bisquerna
>> > + (package
>> > + (name "r-bisquerna")
>> > + (version "1.0.4")
>> > + (source (origin
>> > + (method url-fetch)
>> > + (uri (cran-uri "BisqueRNA" version))
>> > + (sha256
>> > + (base32
>> > + "01g34n87ml7n3pck77497ddgbv3rr5p4153ac8ninpgjijlm3jw
>> > 2"))))
>>
>> Why is this in (gnu packages bioinformatics) and not in (gnu packages
>> cran)?
>
> It seemed so "bioinformatics"-specific. But you're right, it's a CRAN
> package, so that may be a better fit. Shall I move it to CRAN?
If you have time to do that, yes please. Some time ago I started a
half-hearted migration of R packages from (gnu packages bioinformatics)
to (gnu packages cran) and (gnu packages bioconductor). It’s not
supremely important, but I think in the long term we’d like to have CRAN
things in (gnu packages cran) and Bioconductor things in (gnu packages
bioconductor), because it’s deliciously unsurprising. :)
>> > + (synopsis "Decomposition of Bulk Expression with Single-Cell
>> > Sequencing")
>>
>> Please use lowercase where it would be normally used.
>
> My mistake. I will take better care of this in the future.
Thank you!
Perhaps we could sprinkle some smarts over the CRAN importer to do this
automatically, but with R packages we often have names of methods that
should be upper case (like “Bayes*” or “SNPs”), so I have shied away
from developing heuristics for that.
Thanks for adding more R packages!
--
Ricardo
next prev parent reply other threads:[~2020-09-10 11:30 UTC|newest]
Thread overview: 7+ messages / expand[flat|nested] mbox.gz Atom feed top
[not found] <20200909150314.13619.80121@vcs0.savannah.gnu.org>
2020-09-09 16:04 ` branch master updated: gnu: Add r-bisquerna Ricardo Wurmus
2020-09-10 10:48 ` Roel Janssen
2020-09-10 11:31 ` Ricardo Wurmus [this message]
2020-09-10 11:49 ` zimoun
2020-09-10 12:33 ` Ricardo Wurmus
2020-09-10 14:43 ` Roel Janssen
2020-09-11 18:13 ` zimoun
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